Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   HWI53_RS01260 Genome accession   NZ_CP064494
Coordinates   305694..306590 (+) Length   298 a.a.
NCBI ID   WP_002456718.1    Uniprot ID   A0A2T4LGX3
Organism   Staphylococcus epidermidis strain UMCG380     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 300694..311590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HWI53_RS01240 (HWI53_01235) - 301379..302923 (+) 1545 WP_001830616.1 NAD(P)H-binding protein -
  HWI53_RS01245 (HWI53_01240) - 303046..304515 (-) 1470 WP_002437984.1 alkaline phosphatase -
  HWI53_RS01250 (HWI53_01245) - 304813..304992 (+) 180 WP_001830653.1 hypothetical protein -
  HWI53_RS01255 (HWI53_01250) braR 305023..305688 (+) 666 WP_001830679.1 response regulator transcription factor Regulator
  HWI53_RS01260 (HWI53_01255) braS 305694..306590 (+) 897 WP_002456718.1 HAMP domain-containing sensor histidine kinase Regulator
  HWI53_RS01265 (HWI53_01260) - 306701..307450 (+) 750 WP_001830627.1 ABC transporter ATP-binding protein -
  HWI53_RS01270 (HWI53_01265) - 307452..309464 (+) 2013 WP_002456335.1 ABC transporter permease -
  HWI53_RS01275 (HWI53_01270) - 309568..310158 (+) 591 WP_001830621.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34883.51 Da        Isoelectric Point: 6.8361

>NTDB_id=502370 HWI53_RS01260 WP_002456718.1 305694..306590(+) (braS) [Staphylococcus epidermidis strain UMCG380]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLSFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDAQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNHGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=502370 HWI53_RS01260 WP_002456718.1 305694..306590(+) (braS) [Staphylococcus epidermidis strain UMCG380]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTGTTTTCTTTACCTTTTGATGCATACGTACTAGCAATCAGTATAATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAGTTTTAAAAAGAATGAACATCTTAAAGATAAAGTAGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAACGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTCGACAAGAAATTGTGCACATTGATAATTATA
CAAGTCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
TATTTTAACCGATGCACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATTTGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACTGGTATAGGTCTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAGTTGAATCATGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T4LGX3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60.339

98.993

0.597