Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   KNZ81_RS09365 Genome accession   NZ_CP076385
Coordinates   2227680..2228738 (-) Length   352 a.a.
NCBI ID   WP_003950647.1    Uniprot ID   A0ABR4SBH8
Organism   Streptomyces sp. G11C(2021)     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2222680..2233738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNZ81_RS09345 (KNZ81_09335) - 2222710..2223696 (-) 987 WP_023417253.1 ABC transporter permease -
  KNZ81_RS09350 (KNZ81_09340) - 2223689..2224612 (-) 924 WP_023417254.1 ABC transporter permease -
  KNZ81_RS09355 (KNZ81_09345) - 2224704..2226335 (-) 1632 WP_033954242.1 ABC transporter substrate-binding protein -
  KNZ81_RS09360 (KNZ81_09350) - 2226539..2227687 (-) 1149 WP_023417256.1 ABC transporter ATP-binding protein -
  KNZ81_RS09365 (KNZ81_09355) amiE 2227680..2228738 (-) 1059 WP_003950647.1 ABC transporter ATP-binding protein Regulator
  KNZ81_RS09370 (KNZ81_09360) - 2228750..2229718 (-) 969 WP_033950601.1 ABC transporter permease -
  KNZ81_RS09375 (KNZ81_09365) - 2229711..2230640 (-) 930 WP_033950600.1 ABC transporter permease -
  KNZ81_RS09380 (KNZ81_09370) - 2230779..2232401 (-) 1623 WP_033950598.1 ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 38396.30 Da        Isoelectric Point: 6.5011

>NTDB_id=502302 KNZ81_RS09365 WP_003950647.1 2227680..2228738(-) (amiE) [Streptomyces sp. G11C(2021)]
MTTTAKTATVPGPRAAADYDGHLLEVRDLHVEFHTRDGVAKAVNGVNYTVDAGETLAVLGESGSGKSVTAQAIMGILDMP
PGRIPQGEVLFRGQDMLTMGKEERRKIRGQKIAMIFQDALSSLNPVLSVGYQLGEMFRVHQGLSKKEAKAKAIELMERVK
IPAAKERVNDYPHQFSGGMRQRIMIAMALALEPDLIIADEPTTALDVTVQAQVMDLLAELQREYNMGLILITHDLGVVAD
VADKIAVMYAGRIVETAPVHELYARPAHPYTRGLLDSIPRLDQKGQELYAIKGLPPNLTRIPSGCAFNPRCPMAQDICRT
EVPTLAPVTEQDGTDLPGRGSACHFWKETIHG

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=502302 KNZ81_RS09365 WP_003950647.1 2227680..2228738(-) (amiE) [Streptomyces sp. G11C(2021)]
GTGACCACCACCGCCAAGACCGCGACGGTCCCCGGACCGCGCGCGGCCGCCGACTACGACGGCCACCTGCTCGAAGTCCG
TGACCTGCACGTGGAGTTCCACACCCGGGACGGCGTCGCCAAGGCCGTCAACGGGGTCAACTACACCGTTGACGCCGGCG
AGACCCTCGCCGTCCTCGGCGAGTCCGGCTCCGGCAAGTCCGTCACAGCCCAGGCCATCATGGGCATCCTCGACATGCCG
CCCGGCCGCATCCCGCAGGGCGAGGTGCTCTTCCGCGGCCAGGACATGCTCACCATGGGCAAGGAGGAGCGGCGGAAGAT
CCGCGGCCAGAAGATCGCCATGATCTTCCAGGACGCGCTCTCCTCGCTCAACCCGGTCCTCTCCGTGGGCTACCAGCTCG
GCGAGATGTTCCGCGTCCACCAGGGCCTCTCCAAGAAGGAGGCCAAGGCCAAGGCCATCGAGCTGATGGAGCGGGTGAAG
ATCCCCGCCGCCAAGGAGCGGGTCAACGACTACCCGCACCAGTTCTCCGGCGGTATGCGCCAGCGCATCATGATCGCCAT
GGCGCTCGCCCTGGAGCCCGACCTGATCATCGCCGACGAGCCCACCACGGCGCTCGACGTGACGGTGCAGGCCCAGGTCA
TGGACCTGCTCGCGGAACTCCAGCGCGAGTACAACATGGGGCTCATCCTCATCACCCACGACCTCGGTGTCGTCGCCGAC
GTCGCCGACAAGATCGCGGTGATGTACGCGGGCCGGATCGTCGAGACCGCCCCGGTCCACGAGCTGTACGCCCGCCCGGC
GCACCCCTACACCCGGGGTCTGCTCGACTCCATCCCGCGCCTGGACCAGAAGGGCCAGGAGCTGTACGCGATCAAGGGCC
TGCCGCCCAACCTGACGCGTATCCCCTCCGGCTGCGCCTTCAACCCGCGCTGCCCGATGGCGCAGGACATCTGCCGGACC
GAGGTGCCCACCCTGGCCCCCGTCACCGAGCAGGACGGTACGGACCTGCCCGGCCGCGGCAGCGCCTGCCACTTCTGGAA
GGAGACGATCCATGGCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(44-202)

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(254-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

51.351

84.091

0.432
  amiE Streptococcus thermophilus LMG 18311

50.676

84.091

0.426
  amiE Streptococcus thermophilus LMD-9

50.676

84.091

0.426
  oppD Streptococcus mutans UA159

48.701

87.5

0.426