Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   KNZ81_RS06000 Genome accession   NZ_CP076385
Coordinates   1475455..1476240 (+) Length   261 a.a.
NCBI ID   WP_003951282.1    Uniprot ID   A0ABR4S5N7
Organism   Streptomyces sp. G11C(2021)     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1470455..1481240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KNZ81_RS05990 (KNZ81_05990) - 1471312..1474182 (-) 2871 WP_023421505.1 vitamin B12-dependent ribonucleotide reductase -
  KNZ81_RS05995 (KNZ81_05995) nrdR 1474320..1474832 (-) 513 WP_023421506.1 transcriptional regulator NrdR -
  KNZ81_RS06000 (KNZ81_06000) dinR/lexA 1475455..1476240 (+) 786 WP_003951282.1 transcriptional repressor LexA Regulator
  KNZ81_RS06005 (KNZ81_06005) - 1476336..1478324 (-) 1989 WP_033951274.1 ATP-dependent DNA helicase -
  KNZ81_RS06010 (KNZ81_06010) - 1478411..1480273 (-) 1863 WP_023421507.1 IucA/IucC family siderophore biosynthesis protein -

Sequence

Protein


Download         Length: 261 a.a.        Molecular weight: 28190.95 Da        Isoelectric Point: 8.9090

>NTDB_id=502288 KNZ81_RS06000 WP_003951282.1 1475455..1476240(+) (dinR/lexA) [Streptomyces sp. G11C(2021)]
MTTTADSATITAQGRSQGRRESVHAMNEPASPQEGAKPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSM
REIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSAQPADTTGKPAASYVPLVGRIAAGGPILAEESV
EDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDNHIWLLPHNAAY
QPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 786 bp        

>NTDB_id=502288 KNZ81_RS06000 WP_003951282.1 1475455..1476240(+) (dinR/lexA) [Streptomyces sp. G11C(2021)]
GTGACCACGACCGCAGACAGCGCCACCATCACCGCCCAGGGCCGGTCCCAGGGACGACGGGAGTCGGTGCACGCCATGAA
TGAGCCCGCCTCGCCCCAGGAGGGGGCGAAGCCCGCCCGCTCGCTCCCCGGACGACCTCCGGGCATCCGCGCGGACAGCT
CAGGACTGACCGACCGGCAGCGCCGCGTGATCGAGGTCATCCGCGACTCGGTGCAGCGCCGCGGCTACCCGCCGTCGATG
CGCGAGATCGGACAGGCCGTCGGCCTCTCCAGCACCTCCTCGGTGGCCCACCAGCTGATGGCCCTGGAGCGCAAGGGCTT
CCTCCGCCGCGACCCGCACCGCCCCCGGGCGTACGAGGTGCGCGGCTCCGACCAGCCGAGCGCGCAGCCCGCGGACACCA
CGGGCAAGCCCGCCGCCTCCTACGTGCCGCTGGTCGGCCGGATCGCGGCCGGCGGCCCGATCCTCGCCGAGGAGTCGGTC
GAGGACGTCTTCCCCCTCCCCCGCCAGCTGGTCGGTGACGGTGAGCTCTTCGTCCTCAAGGTCGTCGGTGACTCCATGAT
CGAGGCGGCCATCTGCGACGGCGACTGGGTCACCGTCCGCCGCCAGCCCGTCGCGGAGAACGGCGACATCGTCGCCGCGA
TGCTGGACGGCGAGGCCACCGTGAAGCGGTTCAAGCGCGAGGACAACCACATCTGGCTCCTCCCGCACAACGCGGCCTAC
CAGCCGATCCCCGGCGACGAGGCCACCATCCTCGGCAAGGTCGTCGCGGTCCTGCGAAGGGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(143-255)

LexA DNA binding domain (LexA_DNA_bind)

(54-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

81.226

0.379