Detailed information NTG0502264

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KM937_RS21690
• Genome accession: NZ_CP076344
• Coordinates: 4491592..4492575 (-)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain AVS0096
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4486592..4497575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KM937_RS21665 (KM937_21665)	bcsF	4486753..4486944 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
KM937_RS21670 (KM937_21670)	bcsG	4486941..4488620 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
KM937_RS21675 (KM937_21675)	ldrD	4488707..4488814 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
KM937_RS21680 (KM937_21680)	yhjV	4489290..4490561 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
KM937_RS21685 (KM937_21685)	dppF	4490591..4491595 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KM937_RS21690 (KM937_21690)	amiE	4491592..4492575 (-)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
KM937_RS21695 (KM937_21695)	dppC	4492586..4493488 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KM937_RS21700 (KM937_21700)	dppB	4493498..4494517 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
KM937_RS21705 (KM937_21705)	dppA	4494824..4496431 (-)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=502264 KM937_RS21690 WP_001540025.1 4491592..4492575(-) (amiE) [Escherichia coli strain AVS0096]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=502264 KM937_RS21690 WP_001540025.1 4491592..4492575(-) (amiE) [Escherichia coli strain AVS0096]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404