Detailed information NTG0501920

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: A7A12_RS18060
• Genome accession: NZ_CP076285
• Coordinates: 3718296..3719279 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain 41
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3713296..3724279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7A12_RS18035 (A7A12_18040)	-	3714445..3714552 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
A7A12_RS18040 (A7A12_18045)	-	3714928..3715035 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
A7A12_RS18045 (A7A12_18050)	-	3715411..3715518 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
A7A12_RS18050 (A7A12_18055)	yhjV	3715994..3717265 (+)	1272	WP_001447366.1	aromatic amino acid transport family protein	-
A7A12_RS18055 (A7A12_18060)	dppF	3717295..3718299 (-)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
A7A12_RS18060 (A7A12_18065)	amiE	3718296..3719279 (-)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
A7A12_RS18065 (A7A12_18070)	dppC	3719290..3720192 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
A7A12_RS18070 (A7A12_18075)	dppB	3720202..3721221 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
A7A12_RS18075 (A7A12_18080)	dppA	3721372..3722979 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=501920 A7A12_RS18060 WP_001196496.1 3718296..3719279(-) (amiE) [Escherichia coli strain 41]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=501920 A7A12_RS18060 WP_001196496.1 3718296..3719279(-) (amiE) [Escherichia coli strain 41]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401