Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RSAU_RS03270 Genome accession   NC_022222
Coordinates   684981..685655 (+) Length   224 a.a.
NCBI ID   WP_020977053.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus 6850     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 679981..690655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RSAU_RS03240 (RSAU_000630) - 680197..681264 (+) 1068 WP_020977051.1 hypothetical protein -
  RSAU_RS03245 (RSAU_000631) - 681415..682458 (+) 1044 WP_001030757.1 alpha/beta hydrolase -
  RSAU_RS03255 (RSAU_000632) - 682787..683216 (+) 430 Protein_624 hypothetical protein -
  RSAU_RS03260 (RSAU_000633) - 683423..683929 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  RSAU_RS03265 (RSAU_000634) graX 684042..684965 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  RSAU_RS03270 (RSAU_000635) braR 684981..685655 (+) 675 WP_020977053.1 response regulator transcription factor GraR/ApsR Regulator
  RSAU_RS03275 (RSAU_000636) graS 685648..686688 (+) 1041 WP_020977054.1 histidine kinase GraS/ApsS -
  RSAU_RS03280 (RSAU_000637) vraF 686832..687593 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  RSAU_RS03285 (RSAU_000638) vraG 687583..689472 (+) 1890 WP_000143631.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26121.00 Da        Isoelectric Point: 4.4019

>NTDB_id=50192 RSAU_RS03270 WP_020977053.1 684981..685655(+) (braR) [Staphylococcus aureus subsp. aureus 6850]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTITWQDAIIDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=50192 RSAU_RS03270 WP_020977053.1 684981..685655(+) (braR) [Staphylococcus aureus subsp. aureus 6850]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGATAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTCCTGTCTAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

42.534

98.661

0.42

Multiple sequence alignment