Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   RSAU_RS00120 Genome accession   NC_022222
Coordinates   29542..30342 (+) Length   266 a.a.
NCBI ID   WP_020976813.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus 6850     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24542..35342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RSAU_RS00105 (RSAU_000021) walK 25211..27037 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  RSAU_RS00110 (RSAU_000022) yycH 27030..28364 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  RSAU_RS00115 (RSAU_000023) - 28365..29153 (+) 789 WP_001104161.1 two-component system regulatory protein YycI -
  RSAU_RS00120 (RSAU_000024) vicX 29542..30342 (+) 801 WP_020976813.1 MBL fold metallo-hydrolase Regulator
  RSAU_RS00125 (RSAU_000025) adsA 30569..32881 (+) 2313 WP_020976814.1 LPXTG-anchored adenosine synthase AdsA -
  RSAU_RS00130 (RSAU_000027) rlmH 33249..33728 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  RSAU_RS14725 (RSAU_000028) - 33827..34411 (+) 585 WP_020976816.1 dsDNA nuclease domain-containing protein -
  RSAU_RS14730 (RSAU_000029) - 34359..34763 (+) 405 WP_020976817.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.54 Da        Isoelectric Point: 6.3392

>NTDB_id=50183 RSAU_RS00120 WP_020976813.1 29542..30342(+) (vicX) [Staphylococcus aureus subsp. aureus 6850]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDIESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=50183 RSAU_RS00120 WP_020976813.1 29542..30342(+) (vicX) [Staphylococcus aureus subsp. aureus 6850]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAGGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATATTGAATCGTTTAATGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGTCACGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477

Multiple sequence alignment