Detailed information NTG0501445

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: IUJ52_RS09485
• Genome accession: NZ_CP064379
• Coordinates: 2030656..2031663 (+)
• Length: 335 a.a.
• NCBI ID: WP_004728525.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain PartQ-Vfurnissii-RM8376
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2025656..2036663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IUJ52_RS09465 (IUJ52_09460)	metJ	2025803..2026120 (+)	318	WP_004728521.1	met regulon transcriptional regulator MetJ	-
IUJ52_RS09470 (IUJ52_09465)	-	2026197..2027471 (-)	1275	WP_004728522.1	malic enzyme-like NAD(P)-binding protein	-
IUJ52_RS09475 (IUJ52_09470)	rpmE	2027682..2027900 (-)	219	WP_004728523.1	50S ribosomal protein L31	-
IUJ52_RS09480 (IUJ52_09475)	priA	2028147..2030348 (+)	2202	WP_004728524.1	primosomal protein N'	-
IUJ52_RS09485 (IUJ52_09480)	cytR	2030656..2031663 (+)	1008	WP_004728525.1	DNA-binding transcriptional regulator CytR	Regulator
IUJ52_RS09490 (IUJ52_09485)	-	2031793..2032344 (+)	552	WP_038152602.1	SPOR domain-containing protein	-
IUJ52_RS09495 (IUJ52_09490)	hslV	2032483..2033040 (+)	558	WP_014204312.1	ATP-dependent protease subunit HslV	-
IUJ52_RS09500 (IUJ52_09495)	hslU	2033077..2034408 (+)	1332	WP_004728528.1	HslU--HslV peptidase ATPase subunit	-
IUJ52_RS09505 (IUJ52_09500)	-	2034502..2035419 (+)	918	WP_004728529.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
IUJ52_RS09510 (IUJ52_09505)	rraA	2035495..2036031 (+)	537	WP_004728530.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36886.40 Da
• Isoelectric Point: 6.3510

>NTDB_id=501445 IUJ52_RS09485 WP_004728525.1 2030656..2031663(+) (cytR) [Vibrio furnissii strain PartQ-Vfurnissii-RM8376]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAQIAGPEAAVLCQFRQQGYQQALRRAGISRNPTYSTIGDFTFESGAKAVRQLMALPEPPTA
IFCHNDTMAIGAIQEAKRLGMRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLD
TQLVIRESAAPPRSA

Nucleotide

• Length: 1008 bp

>NTDB_id=501445 IUJ52_RS09485 WP_004728525.1 2030656..2031663(+) (cytR) [Vibrio furnissii strain PartQ-Vfurnissii-RM8376]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTATCGACGGCGACAGTCTCGCGCGCTCTGATGAATCCCGAGAA
AGTTTCAGCCTCAACTCGTAAACGGGTTGAAGAGGCGGTTTTAGAAGCTGGCTATTCACCGAATTCTTTAGCCCGAAATC
TGCGTCGCAATGAATCGAAAACCATTGTCGCGATCGTGCCGGACATCTGTGATCCTTATTACACCGAAATTATTCGTGGT
ATCGAAGACGCCGCGATGGAACACGGTTATCTGGTACTGCTGGGTGACAGCGGTCAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACTTGGTGTTTACCAAACAGGCGGACGGTATGCTATTGCTGGGGACCGATTTGCCGTTTGACGTGAGCAAACCTG
AGCAGAAAAACCTGCCACCGATGGTGATGGCGTGTGAGTTTGCGCCAGAACTTGAATTGCCGACGGTGCATATCGATAAC
CTGACATCTGCCTTTGAAGCGGTGAACTATCTGACGCAGATGGGGCACAAACGCATCGCGCAGATTGCCGGTCCTGAAGC
GGCGGTGTTGTGTCAGTTCCGTCAGCAAGGGTATCAACAAGCCCTGCGCCGCGCGGGGATTTCACGCAATCCAACCTACA
GTACCATCGGTGACTTTACGTTTGAGTCGGGGGCCAAAGCGGTGCGCCAATTGATGGCCCTGCCAGAGCCGCCGACAGCC
ATTTTCTGTCACAACGATACCATGGCGATTGGTGCCATTCAGGAAGCCAAGCGCTTGGGCATGCGTGTGCCGCAAGACCT
GTCTGTGGTCGGCTTTGATGACATTCAGTTTGCGCAGTACTGCGATCCACCGCTAACCACCATTTCTCAGCCGCGTTACG
AGATCGGCCGTCAGGCGATGTTGATGATGCTTGAGTTACTGCGGGGTCATGATGTGCGTGCGGGCTCGCGTTTGCTCGAC
ACCCAATTGGTCATTCGCGAGAGTGCAGCGCCGCCCCGCTCGGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	93.373	99.104	0.925
cytR	Vibrio parahaemolyticus RIMD 2210633	90.149	100	0.901