Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   IUJ54_RS04530 Genome accession   NZ_CP064378
Coordinates   1053608..1053949 (-) Length   113 a.a.
NCBI ID   WP_010947130.1    Uniprot ID   Q5ZVN9
Organism   Legionella pneumophila subsp. pneumophila strain PartS-Lpneumophila-RM8376     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1048608..1058949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IUJ54_RS04510 (IUJ54_04505) - 1048848..1050128 (+) 1281 WP_010947134.1 MFS transporter -
  IUJ54_RS04515 (IUJ54_04510) - 1050204..1051496 (-) 1293 WP_010947133.1 MFS transporter -
  IUJ54_RS04520 (IUJ54_04515) - 1051552..1052652 (-) 1101 WP_010947132.1 anhydro-N-acetylmuramic acid kinase -
  IUJ54_RS04525 (IUJ54_04520) - 1052764..1053552 (-) 789 WP_015444530.1 TatD family hydrolase -
  IUJ54_RS04530 (IUJ54_04525) pilZ 1053608..1053949 (-) 342 WP_010947130.1 PilZ domain-containing protein Machinery gene
  IUJ54_RS04535 (IUJ54_04530) - 1054076..1054981 (-) 906 WP_010947129.1 DNA polymerase III subunit delta' -
  IUJ54_RS04540 (IUJ54_04535) tmk 1054978..1055616 (-) 639 WP_010947128.1 dTMP kinase -
  IUJ54_RS04545 (IUJ54_04540) mltG 1055616..1056614 (-) 999 WP_010947127.1 endolytic transglycosylase MltG -
  IUJ54_RS04550 (IUJ54_04545) fabF 1056615..1057853 (-) 1239 WP_010947126.1 beta-ketoacyl-ACP synthase II -
  IUJ54_RS04555 (IUJ54_04550) acpP 1057873..1058121 (-) 249 WP_003631752.1 acyl carrier protein -

Sequence

Protein


Download         Length: 113 a.a.        Molecular weight: 12521.54 Da        Isoelectric Point: 8.2421

>NTDB_id=501394 IUJ54_RS04530 WP_010947130.1 1053608..1053949(-) (pilZ) [Legionella pneumophila subsp. pneumophila strain PartS-Lpneumophila-RM8376]
MTEKPQIINCSFPNEASLYMAYMPFVKGGGLFIRTQHVYSLGQSLELSVKLLNENEPYLVTGKIVWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=501394 IUJ54_RS04530 WP_010947130.1 1053608..1053949(-) (pilZ) [Legionella pneumophila subsp. pneumophila strain PartS-Lpneumophila-RM8376]
ATGACCGAAAAACCACAGATTATAAACTGCTCATTTCCCAATGAAGCATCTTTGTACATGGCTTACATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAACTCAACACGTTTATTCTCTAGGGCAGTCGCTTGAATTATCTGTTAAATTGCTCAATG
AAAATGAACCATATTTGGTCACTGGTAAAATAGTCTGGATTACTCCTAAAGGTGCACAAGGTAATAAGCCGCCGGGAGTT
GGTATTCAATTTACCGGTGAAAACAGTCGTTATCTATGTAACAAGATAGAAACTTATTTGGCAGGAATGCTAAAATCATG
TCAGGTTACAGATACTATATAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(10-101)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZVN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

99.115

100

0.991
  pilZ Legionella pneumophila strain ERS1305867

99.115

100

0.991