Detailed information NTG0501212

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: A7A18_RS19435
• Genome accession: NZ_CP076262
• Coordinates: 3959054..3960037 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain 0-4
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3954054..3965037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7A18_RS19410 (A7A18_19370)	-	3955203..3955310 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
A7A18_RS19415 (A7A18_19375)	-	3955686..3955793 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
A7A18_RS19420 (A7A18_19380)	-	3956169..3956276 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
A7A18_RS19425 (A7A18_19385)	yhjV	3956752..3958023 (+)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
A7A18_RS19430 (A7A18_19390)	dppF	3958053..3959057 (-)	1005	WP_000107038.1	dipeptide ABC transporter ATP-binding subunit DppF	-
A7A18_RS19435 (A7A18_19395)	amiE	3959054..3960037 (-)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
A7A18_RS19440 (A7A18_19400)	dppC	3960048..3960950 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
A7A18_RS19445 (A7A18_19405)	dppB	3960960..3961979 (-)	1020	WP_000938864.1	dipeptide ABC transporter permease DppB	-
A7A18_RS19450 (A7A18_19410)	dppA	3962287..3963894 (-)	1608	WP_033547472.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=501212 A7A18_RS19435 WP_001196496.1 3959054..3960037(-) (amiE) [Escherichia coli strain 0-4]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=501212 A7A18_RS19435 WP_001196496.1 3959054..3960037(-) (amiE) [Escherichia coli strain 0-4]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401