Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IUJ45_RS10335 Genome accession   NZ_CP064367
Coordinates   2043610..2044071 (-) Length   153 a.a.
NCBI ID   WP_002235024.1    Uniprot ID   Q9JTP4
Organism   Neisseria meningitidis strain PartJ-Nmeningitidis-RM8376     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2038610..2049071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IUJ45_RS10315 (IUJ45_10445) surE 2040130..2040876 (+) 747 WP_002220609.1 5'/3'-nucleotidase SurE -
  IUJ45_RS10320 (IUJ45_10455) - 2041132..2042379 (+) 1248 WP_002239875.1 M23 family metallopeptidase -
  IUJ45_RS10325 (IUJ45_10460) - 2042740..2043222 (-) 483 WP_002216871.1 acyl-CoA thioesterase -
  IUJ45_RS10330 (IUJ45_10465) - 2043375..2043536 (-) 162 WP_002239941.1 hypothetical protein -
  IUJ45_RS10335 (IUJ45_10470) recX 2043610..2044071 (-) 462 WP_002235024.1 recombination regulator RecX Regulator
  IUJ45_RS10340 (IUJ45_10475) - 2044139..2044846 (-) 708 WP_002235023.1 phosphoglycolate phosphatase -
  IUJ45_RS10345 (IUJ45_10480) - 2045253..2046518 (+) 1266 WP_002222259.1 Glu/Leu/Phe/Val dehydrogenase -
  IUJ45_RS10350 (IUJ45_10485) - 2046576..2047382 (-) 807 WP_002246280.1 DUF4198 domain-containing protein -
  IUJ45_RS10355 (IUJ45_10490) - 2047727..2047936 (+) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17716.09 Da        Isoelectric Point: 10.0960

>NTDB_id=501193 IUJ45_RS10335 WP_002235024.1 2043610..2044071(-) (recX) [Neisseria meningitidis strain PartJ-Nmeningitidis-RM8376]
MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKLAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=501193 IUJ45_RS10335 WP_002235024.1 2043610..2044071(-) (recX) [Neisseria meningitidis strain PartJ-Nmeningitidis-RM8376]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAACTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACTGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9JTP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.732

100

0.967