Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   IUJ46_RS06390 Genome accession   NZ_CP064364
Coordinates   1223599..1224324 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain PartK-Spyogenes-RM8376     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1218599..1229324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IUJ46_RS06355 (IUJ46_06325) - 1218633..1218929 (-) 297 WP_002983486.1 YlxR family protein -
  IUJ46_RS06360 (IUJ46_06330) nusA 1218945..1220102 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  IUJ46_RS06365 (IUJ46_06335) rimP 1220277..1220813 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  IUJ46_RS06375 (IUJ46_06345) trmB 1221072..1221707 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  IUJ46_RS06380 (IUJ46_06350) - 1221707..1222498 (-) 792 WP_002983385.1 phosphotransferase family protein -
  IUJ46_RS06385 (IUJ46_06355) - 1222562..1223596 (-) 1035 WP_010922583.1 ABC transporter permease -
  IUJ46_RS06390 (IUJ46_06360) pptA 1223599..1224324 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  IUJ46_RS06395 (IUJ46_06365) - 1224396..1224815 (+) 420 WP_002983376.1 HIT family protein -
  IUJ46_RS06400 (IUJ46_06370) - 1224812..1225168 (+) 357 WP_002988657.1 hypothetical protein -
  IUJ46_RS06405 (IUJ46_06375) - 1225279..1226553 (-) 1275 WP_010922584.1 LCP family protein -
  IUJ46_RS06410 (IUJ46_06380) - 1226562..1227086 (-) 525 WP_009880752.1 N-acetyltransferase -
  IUJ46_RS06415 (IUJ46_06385) tsaE 1227061..1227522 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  IUJ46_RS06420 (IUJ46_06390) - 1227676..1229136 (-) 1461 WP_011285677.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=501080 IUJ46_RS06390 WP_002983379.1 1223599..1224324(-) (pptA) [Streptococcus pyogenes strain PartK-Spyogenes-RM8376]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=501080 IUJ46_RS06390 WP_002983379.1 1223599..1224324(-) (pptA) [Streptococcus pyogenes strain PartK-Spyogenes-RM8376]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714