Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   SAAG_RS02830 Genome accession   NC_022113
Coordinates   612739..613413 (+) Length   224 a.a.
NCBI ID   WP_001166499.1    Uniprot ID   Q6GJ11
Organism   Staphylococcus aureus subsp. aureus 55/2053     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 607739..618413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAAG_RS02800 (SAAG_01076) - 607966..609033 (+) 1068 WP_000980141.1 membrane protein -
  SAAG_RS02805 (SAAG_01077) - 609184..610227 (+) 1044 WP_001030763.1 alpha/beta hydrolase -
  SAAG_RS02815 (SAAG_01078) - 610555..610983 (+) 429 WP_000198497.1 hypothetical protein -
  SAAG_RS02820 (SAAG_01079) - 611181..611687 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  SAAG_RS02825 (SAAG_01080) graX 611800..612723 (+) 924 WP_000802949.1 auxiliary protein GraX/ApsX -
  SAAG_RS02830 (SAAG_01081) braR 612739..613413 (+) 675 WP_001166499.1 response regulator transcription factor GraR/ApsR Regulator
  SAAG_RS02835 (SAAG_01082) graS 613406..614446 (+) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  SAAG_RS02840 (SAAG_01083) vraF 614593..615354 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  SAAG_RS02845 (SAAG_01084) - 615344..617233 (+) 1890 WP_000009408.1 FtsX-like permease family protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.3968

>NTDB_id=50105 SAAG_RS02830 WP_001166499.1 612739..613413(+) (braR) [Staphylococcus aureus subsp. aureus 55/2053]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVIDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=50105 SAAG_RS02830 WP_001166499.1 612739..613413(+) (braR) [Staphylococcus aureus subsp. aureus 55/2053]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CTGTCATTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATTTTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGGGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q6GJ11

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406


Multiple sequence alignment