Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   IUJ42_RS10610 Genome accession   NZ_CP064359
Coordinates   2227134..2227799 (-) Length   221 a.a.
NCBI ID   WP_001830679.1    Uniprot ID   A0A2G7HYS8
Organism   Staphylococcus epidermidis strain PartG-Sepidermidis-RM8376     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2222134..2232799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IUJ42_RS10585 (IUJ42_10610) - 2222312..2222491 (-) 180 Protein_2061 solute:sodium symporter family transporter -
  IUJ42_RS10590 (IUJ42_10615) - 2222664..2223254 (-) 591 WP_002485462.1 DUF4064 domain-containing protein -
  IUJ42_RS10595 (IUJ42_10620) - 2223358..2225370 (-) 2013 WP_002470142.1 ABC transporter permease -
  IUJ42_RS10600 (IUJ42_10625) - 2225372..2226121 (-) 750 WP_001830627.1 ABC transporter ATP-binding protein -
  IUJ42_RS10605 (IUJ42_10630) braS 2226232..2227128 (-) 897 WP_002456718.1 sensor histidine kinase Regulator
  IUJ42_RS10610 (IUJ42_10635) braR 2227134..2227799 (-) 666 WP_001830679.1 response regulator transcription factor Regulator
  IUJ42_RS10615 (IUJ42_10640) - 2227830..2228009 (-) 180 WP_002456719.1 hypothetical protein -
  IUJ42_RS10620 (IUJ42_10645) - 2228306..2229775 (+) 1470 WP_002456720.1 alkaline phosphatase -
  IUJ42_RS10625 (IUJ42_10650) - 2229898..2231442 (-) 1545 WP_002485467.1 NAD(P)H-binding protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25629.71 Da        Isoelectric Point: 5.0250

>NTDB_id=501048 IUJ42_RS10610 WP_001830679.1 2227134..2227799(-) (braR) [Staphylococcus epidermidis strain PartG-Sepidermidis-RM8376]
MKIFIVEDDLVIAESLANELSKWNYEVHVVDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEMRKVSHVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=501048 IUJ42_RS10610 WP_001830679.1 2227134..2227799(-) (braR) [Staphylococcus epidermidis strain PartG-Sepidermidis-RM8376]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
GCATGTGGTTGATAATTTTGAAAAGATAATGGAAGATTTTCGCCGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACACTTAATGGCTTCCATTGGTGCCAAGAAATGCGAAAAGTATCTCATGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATCCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCCAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAGTGTTGGGAGTCTGAGAATTTTATTGA
TGATAATACGCTCGCAGTAAATATGACACGATTACGAAAAAAATTACTTTCTATCGGTGTCGATGATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G7HYS8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792