Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KE3_RS05820 Genome accession   NC_021900
Coordinates   1149213..1150952 (-) Length   579 a.a.
NCBI ID   WP_020916932.1    Uniprot ID   A0AB33AMB2
Organism   Streptococcus lutetiensis 033     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1144213..1155952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS05790 - 1144290..1144787 (+) 498 WP_043895061.1 HdeD family acid-resistance protein -
  KE3_RS05795 (KE3_1181) queF 1144824..1145315 (-) 492 WP_020916929.1 preQ(1) synthase -
  KE3_RS05800 (KE3_1182) queE 1145465..1146184 (-) 720 Protein_1105 7-carboxy-7-deazaguanine synthase QueE -
  KE3_RS05805 (KE3_1184) queD 1146177..1146623 (-) 447 WP_020916930.1 6-carboxytetrahydropterin synthase QueD -
  KE3_RS05810 queC 1146623..1147276 (-) 654 Protein_1107 7-cyano-7-deazaguanine synthase QueC -
  KE3_RS05815 (KE3_1185) rcrQ 1147441..1149210 (-) 1770 WP_020916931.1 ABC transporter ATP-binding protein Regulator
  KE3_RS05820 (KE3_1186) rcrP 1149213..1150952 (-) 1740 WP_020916932.1 ABC transporter ATP-binding protein Regulator
  KE3_RS05825 (KE3_1187) - 1151060..1151755 (-) 696 WP_020916933.1 hypothetical protein -
  KE3_RS05830 (KE3_1188) - 1151783..1153651 (-) 1869 WP_020916934.1 ABC-F family ATP-binding cassette domain-containing protein -
  KE3_RS05835 (KE3_1189) - 1153648..1154853 (-) 1206 WP_020916935.1 CCA tRNA nucleotidyltransferase -
  KE3_RS05840 (KE3_1190) dapB 1154850..1155617 (-) 768 WP_020916936.1 4-hydroxy-tetrahydrodipicolinate reductase -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 64987.49 Da        Isoelectric Point: 5.8526

>NTDB_id=50058 KE3_RS05820 WP_020916932.1 1149213..1150952(-) (rcrP) [Streptococcus lutetiensis 033]
MKLIWTYLKRYPKWLVLDVIGALTFVVVNLGLPTALARMIDQGVTVGNKNKVYFWALVMLVVIILGMIGRVILAYAAGKI
TTNMIKDMRNDMYDKLQQYSHQEYEQIGVSSLVTRMTSDAFILMQFAEQTLRMGVITPLMMISSVVMILVTSPSLAWIVA
VAIPFLVLVVYYVATRTRPLSEKQQSTLDKINQYVRENLTGLRVIRAFAREDFQEQRFGSKNDEYKDLSSRLFILTGLTE
PLFVLIIISMIVAIVWFALNPLAHGELQIGNLVAFIEYSFHALFSFLLFANFFTMYPRMVVSSERISEVMAMPISIDPND
DGVTETATKGYLEFDKVTFAYPGETESPVLKDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGKILVDGVDVRD
YQLKALRQKIGFIPQKALLFTGTIEENLKYGKSDATSEELQAAADIAQAKEFIESRDDRYQTHLAEGGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYKTDAQLRARLKEVTQEATVLIVAQRVGTIMDADQIIVLDKGEIVGRGTHDELMQSND
IYREIANSQLNKAEEMKGE

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=50058 KE3_RS05820 WP_020916932.1 1149213..1150952(-) (rcrP) [Streptococcus lutetiensis 033]
ATGAAACTCATTTGGACTTATTTGAAAAGATACCCAAAATGGCTAGTGCTCGATGTTATTGGGGCGCTTACCTTTGTAGT
GGTTAACTTAGGCTTACCAACGGCTCTTGCTCGAATGATTGATCAAGGAGTTACAGTTGGAAATAAGAATAAGGTCTATT
TCTGGGCACTGGTTATGCTGGTTGTCATCATCTTGGGGATGATTGGACGTGTGATTCTTGCTTATGCAGCAGGAAAAATT
ACCACAAACATGATTAAGGATATGCGCAATGACATGTATGATAAGTTACAGCAATATTCACATCAAGAATATGAACAAAT
CGGTGTGTCTTCCTTGGTAACACGGATGACCAGTGATGCTTTTATCTTGATGCAGTTTGCTGAGCAGACGTTACGTATGG
GTGTCATTACACCTTTAATGATGATTTCTAGTGTGGTGATGATTTTAGTAACCAGTCCATCGCTTGCTTGGATTGTAGCA
GTTGCTATTCCATTTTTGGTTCTGGTTGTTTACTATGTGGCAACTCGTACGCGTCCTTTATCAGAAAAACAACAATCAAC
TCTTGATAAAATCAACCAATATGTTCGTGAAAATTTAACTGGTTTACGTGTCATTCGTGCTTTTGCGAGAGAAGATTTTC
AAGAACAGCGTTTTGGTAGCAAAAACGATGAATATAAAGACTTATCAAGCCGCTTATTTATTTTAACTGGTTTGACTGAA
CCACTCTTTGTTCTAATCATTATTTCAATGATTGTTGCTATTGTTTGGTTTGCTTTGAACCCATTGGCACATGGTGAGTT
ACAAATCGGTAACTTGGTAGCCTTTATTGAATATAGTTTCCACGCCTTATTCTCATTTCTTTTGTTTGCCAATTTCTTTA
CCATGTATCCTCGTATGGTGGTTTCAAGCGAACGTATTTCGGAAGTTATGGCGATGCCAATTTCCATTGACCCTAATGAT
GATGGTGTGACTGAGACAGCTACAAAAGGTTATTTGGAATTTGACAAGGTAACCTTTGCTTACCCAGGTGAAACGGAAAG
CCCAGTCTTAAAAGATATTTCCTTTAAGGCAAAACCTGGTGAAACCATTGCCTTTATCGGGTCTACGGGTTCTGGTAAGT
CATCACTGGTTAACTTGATTCCACGTTTTTATGACGTGACGCTTGGTAAGATTTTGGTTGATGGCGTTGATGTTAGGGAT
TATCAACTGAAAGCACTTCGTCAAAAGATTGGCTTTATTCCGCAAAAAGCTCTGCTATTTACAGGAACCATCGAAGAAAA
CTTGAAGTATGGTAAGTCTGATGCGACAAGTGAGGAATTGCAAGCGGCAGCTGATATCGCACAAGCTAAAGAATTTATCG
AAAGTCGTGATGACCGTTATCAAACTCATCTAGCTGAAGGCGGAAGCAATTTGTCAGGTGGTCAAAAACAACGTCTTTCA
ATTGCGCGTGCTGTGGTTAAAAAACCAGATATCTACATTTTCGATGATTCTTTTTCAGCGCTTGATTATAAGACAGACGC
TCAGCTGCGTGCTCGTTTGAAAGAGGTGACACAAGAAGCAACTGTTTTAATTGTGGCGCAACGTGTGGGAACTATCATGG
ATGCCGATCAAATCATTGTGCTTGATAAAGGTGAAATTGTTGGACGTGGCACACATGATGAATTGATGCAATCAAATGAT
ATTTATCGTGAAATTGCTAACTCACAATTGAACAAAGCTGAAGAAATGAAAGGAGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(27-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AB33AMB2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.887

91.364

0.364

Multiple sequence alignment