Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KE3_RS05815 Genome accession   NC_021900
Coordinates   1147441..1149210 (-) Length   589 a.a.
NCBI ID   WP_020916931.1    Uniprot ID   A0AB33AM83
Organism   Streptococcus lutetiensis 033     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1142441..1154210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KE3_RS05785 (KE3_1179) gdhA 1142705..1144054 (-) 1350 WP_043895060.1 NADP-specific glutamate dehydrogenase -
  KE3_RS05790 - 1144290..1144787 (+) 498 WP_043895061.1 HdeD family acid-resistance protein -
  KE3_RS05795 (KE3_1181) queF 1144824..1145315 (-) 492 WP_020916929.1 preQ(1) synthase -
  KE3_RS05800 (KE3_1182) queE 1145465..1146184 (-) 720 Protein_1105 7-carboxy-7-deazaguanine synthase QueE -
  KE3_RS05805 (KE3_1184) queD 1146177..1146623 (-) 447 WP_020916930.1 6-carboxytetrahydropterin synthase QueD -
  KE3_RS05810 queC 1146623..1147276 (-) 654 Protein_1107 7-cyano-7-deazaguanine synthase QueC -
  KE3_RS05815 (KE3_1185) rcrQ 1147441..1149210 (-) 1770 WP_020916931.1 ABC transporter ATP-binding protein Regulator
  KE3_RS05820 (KE3_1186) rcrP 1149213..1150952 (-) 1740 WP_020916932.1 ABC transporter ATP-binding protein Regulator
  KE3_RS05825 (KE3_1187) - 1151060..1151755 (-) 696 WP_020916933.1 hypothetical protein -
  KE3_RS05830 (KE3_1188) - 1151783..1153651 (-) 1869 WP_020916934.1 ABC-F family ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65837.03 Da        Isoelectric Point: 5.3654

>NTDB_id=50057 KE3_RS05815 WP_020916931.1 1147441..1149210(-) (rcrQ) [Streptococcus lutetiensis 033]
MSKRNVFLRLWDYLRQYKGALFLAVFLKIFSSVMSVLEPFVLGLAITELTSNLMDMAHGVAGAHLNISYIAIILVLYFVR
GMGYGLSSYGSNFFITKAVQKTIHDLRRDLSEKINKIPVSYFDSQQFGNVLGRFTSDVETVSNALQQSFLRIIEAFTTIT
LVICMVLYLNWRLALVVIAIIPITYLSAKFILGKSQPYFKEQADALGDMNGFVQENLSGFNVIKLYGREEISSQEFREIT
QNLQEVGFKASFISGIMMPVLSAISDMAYLIIAVLGALQVLSGQLTVGNMQAFVQYVWQVSQPVQTITQLASVLQSAKSS
LDRIFEVLDEPEEAAQVTEKLVHDLSGQVTFENVSFQYVADKPLIHNFDLEVKPGEMVAIVGPTGAGKTTLINLLMRFYD
VTDGCIKVDGHDIRNLSRQDYRKQFGMVLQDAWLYEASIKENLRFGNLDATDEEIVAAAKAANVDHFIRTLPGGYNMEMN
QESSNVSLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMEKLMEGRTSFVIAHRLSTIQDADKILVLNNGQ
IVEQGNHESLLAAKGFYYDLYNSQFAKNN

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=50057 KE3_RS05815 WP_020916931.1 1147441..1149210(-) (rcrQ) [Streptococcus lutetiensis 033]
ATGTCGAAACGAAATGTTTTTCTACGTTTATGGGATTATCTCCGACAATATAAAGGTGCACTTTTCTTGGCTGTTTTTCT
AAAAATCTTTAGCAGTGTTATGAGTGTACTGGAGCCATTTGTACTTGGTCTTGCAATCACTGAATTGACGTCAAATCTTA
TGGATATGGCTCATGGTGTGGCTGGTGCTCATCTTAACATCTCTTATATTGCTATTATTTTGGTGCTTTACTTTGTCCGT
GGTATGGGTTATGGGCTAAGTAGCTATGGTTCAAACTTTTTCATTACCAAAGCGGTGCAAAAGACTATTCATGATTTGCG
TCGTGATTTAAGTGAAAAAATTAATAAGATTCCAGTTTCTTACTTCGACAGTCAGCAATTTGGGAACGTCTTGGGACGTT
TTACATCAGATGTTGAAACAGTGTCAAATGCGCTTCAACAAAGTTTCCTTCGTATCATCGAAGCATTTACGACCATTACA
TTGGTTATTTGCATGGTGCTTTATTTGAATTGGCGTCTTGCCTTGGTCGTCATTGCCATTATTCCGATTACTTACCTTAG
TGCTAAATTCATCTTGGGCAAATCGCAACCTTACTTTAAGGAACAAGCAGACGCACTTGGTGATATGAATGGTTTTGTTC
AAGAAAATCTGTCTGGTTTTAATGTCATTAAACTTTATGGACGTGAAGAAATCTCTAGCCAAGAATTTCGTGAGATTACT
CAGAATTTACAAGAAGTTGGCTTTAAAGCAAGCTTCATTTCTGGAATTATGATGCCAGTTTTAAGTGCTATTTCAGATAT
GGCTTACCTGATTATTGCCGTTTTAGGTGCTCTTCAAGTTCTTTCTGGTCAGCTAACTGTTGGTAATATGCAAGCTTTTG
TTCAATATGTTTGGCAAGTGAGTCAACCAGTTCAAACCATTACCCAATTAGCTAGTGTTCTTCAAAGTGCTAAATCATCA
CTTGACCGTATTTTTGAAGTCTTGGATGAGCCAGAGGAAGCAGCACAAGTGACTGAAAAACTAGTACATGACTTGTCTGG
TCAAGTAACCTTTGAAAATGTATCTTTCCAATATGTTGCTGATAAACCATTGATTCATAACTTTGACTTAGAGGTTAAAC
CGGGTGAAATGGTTGCTATTGTCGGACCAACTGGTGCTGGTAAGACAACGCTGATTAATCTTTTGATGCGATTTTACGAT
GTAACGGATGGTTGCATTAAGGTCGATGGTCACGATATTCGTAATTTATCACGCCAAGATTATCGCAAACAATTTGGAAT
GGTCTTACAAGATGCTTGGCTTTATGAAGCAAGTATCAAAGAAAACCTTCGTTTTGGTAATTTGGATGCGACAGATGAAG
AAATCGTGGCAGCCGCAAAAGCCGCTAACGTTGATCACTTTATCCGCACCCTTCCAGGTGGTTACAATATGGAAATGAAT
CAAGAATCAAGCAATGTCTCACTTGGTCAAAAACAACTCTTGACCATTGCGCGTGCTTTGCTTGCTGATCCTAAAATCTT
GATCTTGGATGAAGCAACTTCATCCGTTGATACGCGGCTTGAACTCTTGATTCAAAAGGCTATGGAGAAATTGATGGAAG
GTCGTACAAGCTTTGTGATTGCACACCGCTTGTCAACCATTCAAGATGCTGATAAAATCTTGGTGCTCAACAATGGCCAG
ATTGTTGAGCAAGGAAACCATGAAAGCCTTCTAGCCGCTAAAGGTTTCTATTACGATTTATACAATAGTCAATTTGCTAA
AAACAATTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(21-304)

ABC transporter (ABC_tran)

(366-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AB33AM83

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.388

99.83

0.443

Multiple sequence alignment