Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IQ966_RS25765 Genome accession   NZ_CP064275
Coordinates   4953354..4954304 (-) Length   316 a.a.
NCBI ID   WP_243549515.1    Uniprot ID   -
Organism   Priestia megaterium strain B1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4948354..4959304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IQ966_RS25735 - 4948429..4949508 (+) 1080 WP_243549514.1 PrsW family intramembrane metalloprotease -
  IQ966_RS25740 - 4949977..4950117 (-) 141 WP_014459290.1 hypothetical protein -
  IQ966_RS25745 - 4950373..4950639 (-) 267 Protein_5000 manganese catalase family protein -
  IQ966_RS25750 - 4950682..4951638 (-) 957 WP_042992040.1 siderophore ABC transporter substrate-binding protein -
  IQ966_RS25755 - 4951662..4952420 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  IQ966_RS25760 - 4952414..4953361 (-) 948 WP_014459288.1 iron chelate uptake ABC transporter family permease subunit -
  IQ966_RS25765 ceuB 4953354..4954304 (-) 951 WP_243549515.1 ABC transporter permease Machinery gene
  IQ966_RS25770 - 4954872..4955678 (-) 807 WP_013057892.1 cell wall hydrolase -
  IQ966_RS25775 - 4956041..4956295 (+) 255 WP_013057893.1 hypothetical protein -
  IQ966_RS25780 - 4956377..4956541 (-) 165 WP_181903737.1 hypothetical protein -
  IQ966_RS25785 - 4957032..4957217 (-) 186 WP_014459286.1 hypothetical protein -
  IQ966_RS25790 - 4957781..4958344 (-) 564 WP_115654347.1 NAD(P)H-dependent oxidoreductase -
  IQ966_RS25795 lepB 4958578..4959138 (-) 561 WP_060745332.1 signal peptidase I -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35012.32 Da        Isoelectric Point: 10.0201

>NTDB_id=500540 IQ966_RS25765 WP_243549515.1 4953354..4954304(-) (ceuB) [Priestia megaterium strain B1]
MKFYQLILVFAVLAVLSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIVAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPRTALLGAVFVLACDLLGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=500540 IQ966_RS25765 WP_243549515.1 4953354..4954304(-) (ceuB) [Priestia megaterium strain B1]
TTGAAGTTTTATCAGTTAATTCTTGTATTTGCTGTACTAGCGGTTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACAATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCGTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTAGCTACCTTCATTGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGATTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAGTCGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTCTTAGGATTAATCATTCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGCAAAAGCCTGCCTCGTAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATCTTTTAGGCAGAGTTATTATTTTTCCTTATGAAATCTCTATTG
GGTTAATGGTAGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.815

95.886

0.497