Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IQ966_RS13205 Genome accession   NZ_CP064275
Coordinates   2481980..2482174 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain B1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2476980..2487174
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IQ966_RS13180 galT 2477044..2478567 (+) 1524 WP_243550250.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  IQ966_RS13185 - 2478610..2479494 (-) 885 WP_116741941.1 NAD(P)-dependent oxidoreductase -
  IQ966_RS13190 - 2479697..2479885 (-) 189 WP_013055400.1 YjzD family protein -
  IQ966_RS13195 - 2480095..2480835 (+) 741 WP_013055401.1 hypothetical protein -
  IQ966_RS13200 - 2481018..2481902 (+) 885 WP_116741943.1 NAD(P)-dependent oxidoreductase -
  IQ966_RS13205 comZ 2481980..2482174 (+) 195 WP_013081746.1 ComZ family protein Regulator
  IQ966_RS13210 - 2482203..2482403 (-) 201 WP_014461595.1 hypothetical protein -
  IQ966_RS13215 - 2482660..2483598 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  IQ966_RS13220 fabF 2483638..2484879 (+) 1242 WP_014461594.1 beta-ketoacyl-ACP synthase II -
  IQ966_RS13225 - 2484986..2485759 (+) 774 WP_014461593.1 DUF2268 domain-containing putative Zn-dependent protease -
  IQ966_RS13230 - 2485986..2487008 (+) 1023 WP_116741949.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=500524 IQ966_RS13205 WP_013081746.1 2481980..2482174(+) (comZ) [Priestia megaterium strain B1]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=500524 IQ966_RS13205 WP_013081746.1 2481980..2482174(+) (comZ) [Priestia megaterium strain B1]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACATGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGACGCTTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563