Detailed information NTG0500503

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: F11EC_RS18800
• Genome accession: NZ_CP076123
• Coordinates: 3927696..3928679 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain F11
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3922696..3933679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F11EC_RS18775 (F11EC_03685)	bcsF	3922857..3923048 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
F11EC_RS18780 (F11EC_03686)	bcsG	3923045..3924724 (+)	1680	WP_000191565.1	cellulose biosynthesis protein BcsG	-
F11EC_RS18785 (F11EC_03687)	ldrD	3924811..3924918 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F11EC_RS18790 (F11EC_03688)	yhjV	3925394..3926665 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
F11EC_RS18795 (F11EC_03689)	dppF	3926695..3927699 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
F11EC_RS18800 (F11EC_03690)	amiE	3927696..3928679 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
F11EC_RS18805 (F11EC_03691)	dppC	3928690..3929592 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
F11EC_RS18810 (F11EC_03692)	dppB	3929602..3930621 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
F11EC_RS18815 (F11EC_03693)	dppA	3930928..3932535 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=500503 F11EC_RS18800 WP_001196477.1 3927696..3928679(-) (amiE) [Escherichia coli strain F11]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=500503 F11EC_RS18800 WP_001196477.1 3927696..3928679(-) (amiE) [Escherichia coli strain F11]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404