Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IQ863_RS13365 Genome accession   NZ_CP064270
Coordinates   2606385..2606579 (-) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain N447-3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2601385..2611579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IQ863_RS13340 - 2601551..2602573 (-) 1023 WP_208732735.1 ABC transporter ATP-binding protein -
  IQ863_RS13345 - 2602800..2603573 (-) 774 WP_014461593.1 DUF2268 domain-containing putative Zn-dependent protease -
  IQ863_RS13350 fabF 2603680..2604921 (-) 1242 WP_014461594.1 beta-ketoacyl-ACP synthase II -
  IQ863_RS13355 - 2604961..2605899 (-) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  IQ863_RS13360 - 2606156..2606356 (+) 201 WP_014461595.1 hypothetical protein -
  IQ863_RS13365 comZ 2606385..2606579 (-) 195 WP_013081746.1 ComZ family protein Regulator
  IQ863_RS13370 - 2606657..2607541 (-) 885 WP_014461596.1 NAD(P)-dependent oxidoreductase -
  IQ863_RS13375 - 2607724..2608464 (-) 741 WP_013055401.1 hypothetical protein -
  IQ863_RS13380 - 2608674..2608862 (+) 189 WP_013055400.1 YjzD family protein -
  IQ863_RS13385 - 2609065..2609949 (+) 885 WP_014461597.1 NAD(P)-dependent oxidoreductase -
  IQ863_RS13390 galT 2609992..2611515 (-) 1524 WP_014461598.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=500446 IQ863_RS13365 WP_013081746.1 2606385..2606579(-) (comZ) [Priestia megaterium strain N447-3]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=500446 IQ863_RS13365 WP_013081746.1 2606385..2606579(-) (comZ) [Priestia megaterium strain N447-3]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACATGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGACGCTTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563