Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IQ680_RS13555 Genome accession   NZ_CP064266
Coordinates   2633986..2634159 (+) Length   57 a.a.
NCBI ID   WP_003195910.1    Uniprot ID   A0A1S9WYF1
Organism   Bacillus pseudomycoides strain N451-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2628986..2639159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IQ680_RS13535 clpC 2629301..2631901 (+) 2601 WP_243521119.1 ATP-dependent chaperone ClpB Regulator
  IQ680_RS13540 - 2631938..2632120 (-) 183 WP_016113766.1 YjzD family protein -
  IQ680_RS13545 - 2632279..2633013 (+) 735 WP_098337461.1 triacylglycerol lipase -
  IQ680_RS13550 - 2633071..2633931 (+) 861 WP_098337460.1 NAD(P)-dependent oxidoreductase -
  IQ680_RS13555 comZ 2633986..2634159 (+) 174 WP_003195910.1 ComZ family protein Regulator
  IQ680_RS13560 fabH 2634277..2635209 (+) 933 WP_098337459.1 beta-ketoacyl-ACP synthase III -
  IQ680_RS13565 fabF 2635240..2636478 (+) 1239 WP_098337458.1 beta-ketoacyl-ACP synthase II -
  IQ680_RS13570 - 2636951..2637454 (+) 504 WP_243521120.1 SMI1/KNR4 family protein -
  IQ680_RS13575 - 2637709..2638497 (+) 789 WP_243521121.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6416.61 Da        Isoelectric Point: 4.9502

>NTDB_id=500414 IQ680_RS13555 WP_003195910.1 2633986..2634159(+) (comZ) [Bacillus pseudomycoides strain N451-2]
MNEKNMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKAGK

Nucleotide


Download         Length: 174 bp        

>NTDB_id=500414 IQ680_RS13555 WP_003195910.1 2633986..2634159(+) (comZ) [Bacillus pseudomycoides strain N451-2]
ATGAACGAAAAAAATATGCAGTTTTTACAAATCGCTATGAAACATTTGCCGGAAGCAAAAGCTATTTTAGATGATAACGG
GATTGCACTTGATATGGAAAAAGCACAACCAGTACTAGAGCTATTAATGAAAGTAATGAATGAAGCATATGAGCTTGGAA
AAGCGGGAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-55)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1S9WYF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

59.259

94.737

0.561