Detailed information NTG0500100

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KKZ13_RS15635
• Genome accession: NZ_CP075737
• Coordinates: 3265662..3266687 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CPF6
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3260662..3271687

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KKZ13_RS15605 (KKZ13_15550)	zapB	3260746..3260991 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
KKZ13_RS15610 (KKZ13_15555)	rraA	3261076..3261561 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
KKZ13_RS15615 (KKZ13_15560)	menA	3261654..3262580 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KKZ13_RS15620 (KKZ13_15565)	hslU	3262647..3263978 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KKZ13_RS15625 (KKZ13_15570)	hslV	3263988..3264518 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KKZ13_RS15630 (KKZ13_15575)	ftsN	3264611..3265570 (-)	960	WP_000068828.1	cell division protein FtsN	-
KKZ13_RS15635 (KKZ13_15580)	cytR	3265662..3266687 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KKZ13_RS15640 (KKZ13_15585)	priA	3266843..3269041 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
KKZ13_RS15645 (KKZ13_15590)	rpmE	3269244..3269456 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
KKZ13_RS15650 (KKZ13_15595)	yiiX	3269517..3270125 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
KKZ13_RS15655 (KKZ13_15600)	metJ	3270309..3270626 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=500100 KKZ13_RS15635 WP_000644904.1 3265662..3266687(-) (cytR) [Escherichia coli strain CPF6]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=500100 KKZ13_RS15635 WP_000644904.1 3265662..3266687(-) (cytR) [Escherichia coli strain CPF6]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628