Detailed information NTG0500086

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: KKZ13_RS13620
• Genome accession: NZ_CP075737
• Coordinates: 2848187..2849170 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain CPF6
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2843187..2854170

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KKZ13_RS13595 (KKZ13_13560)	bcsF	2843348..2843539 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
KKZ13_RS13600 (KKZ13_13565)	bcsG	2843536..2845215 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
KKZ13_RS13605 (KKZ13_13570)	ldrD	2845302..2845409 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
KKZ13_RS13610 (KKZ13_13575)	yhjV	2845885..2847156 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
KKZ13_RS13615 (KKZ13_13580)	dppF	2847186..2848190 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
KKZ13_RS13620 (KKZ13_13585)	amiE	2848187..2849170 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
KKZ13_RS13625 (KKZ13_13590)	dppC	2849181..2850083 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
KKZ13_RS13630 (KKZ13_13595)	dppB	2850093..2851112 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
KKZ13_RS26045 (KKZ13_13600)	-	2851130..2851357 (+)	228	WP_001300936.1	hypothetical protein	-
KKZ13_RS13640 (KKZ13_13605)	dppA	2851420..2853027 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=500086 KKZ13_RS13620 WP_001196486.1 2848187..2849170(-) (amiE) [Escherichia coli strain CPF6]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=500086 KKZ13_RS13620 WP_001196486.1 2848187..2849170(-) (amiE) [Escherichia coli strain CPF6]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404