Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KKZ08_RS12460 Genome accession   NZ_CP075691
Coordinates   2762796..2764694 (+) Length   632 a.a.
NCBI ID   WP_223779026.1    Uniprot ID   -
Organism   Streptomyces sp. 135     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2757796..2769694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KKZ08_RS12445 - 2759056..2759358 (+) 303 WP_223779025.1 YtxH domain-containing protein -
  KKZ08_RS12450 - 2759441..2760868 (+) 1428 WP_223774506.1 FGGY family carbohydrate kinase -
  KKZ08_RS12455 rcrP 2761039..2762772 (+) 1734 WP_223774507.1 ABC transporter ATP-binding protein Regulator
  KKZ08_RS12460 rcrQ 2762796..2764694 (+) 1899 WP_223779026.1 ABC transporter ATP-binding protein Regulator
  KKZ08_RS12465 - 2764720..2765910 (-) 1191 WP_223774508.1 sigma-70 family RNA polymerase sigma factor -
  KKZ08_RS12470 dnaG 2766038..2767936 (-) 1899 WP_223774509.1 DNA primase -
  KKZ08_RS12475 - 2767991..2769253 (-) 1263 WP_223774510.1 FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 632 a.a.        Molecular weight: 68330.54 Da        Isoelectric Point: 4.8731

>NTDB_id=499660 KKZ08_RS12460 WP_223779026.1 2762796..2764694(+) (rcrQ) [Streptomyces sp. 135]
MMGPDSRSMDFKGSGKRLLAQFRPERTTMYGMIAAGILSVALSVLGPKILGRATDLIFAGIIGRDMPADLTKEQVIEGLR
DKGDGGMADMLTGVDFTPGEGIDFGAMGEVLLLALGTFLAAGLLLAVATRLSNRAINRTVFRLRGDVQEKLSRLPLSYFD
KRQRGEVLSRATNDIDNINQTLQQTMGQLINSLLTIIGVLVMMFWVSPLLALVALVTVPLSFFVAMKVGKRSQPQFVQQW
KTTGKLNAHIEEMYTGHALVKVFGRQEESAKAFAEQNDQLYDAGFRAQFISGAMQPLMFFISNLNYVLVAVVGGLRVASG
SLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERVFEILDAEEQEADPVPGERPAKLSGRVEMEHVSFRYAEDK
PLIEDLSLVVEPGHTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVDIAGMSRDELRAGIGMVLQDTWLFGGTIAEN
IAYGAAKEVTREEVEEAARAAHADRFVRTLPDGYDTVIDDDGTGVSAGEKQLITIARAFLSDPVILVLDEATSSVDTRTE
VLIQKAMARLAHGRTSFVIAHRLSTIRDADTILVMENGAIVEQGTHDALLAAGGAYARLYAAQFAEAVAEVD

Nucleotide


Download         Length: 1899 bp        

>NTDB_id=499660 KKZ08_RS12460 WP_223779026.1 2762796..2764694(+) (rcrQ) [Streptomyces sp. 135]
ATGATGGGCCCCGACTCCCGGTCGATGGACTTCAAGGGCTCCGGCAAGCGGCTGCTCGCGCAGTTCAGGCCGGAGCGCAC
CACGATGTACGGGATGATCGCGGCCGGAATCCTGAGCGTCGCGCTCTCCGTCCTCGGCCCGAAGATCCTCGGCAGGGCGA
CCGACCTGATCTTCGCGGGGATCATCGGCCGTGACATGCCCGCGGACCTGACGAAGGAACAGGTGATCGAGGGCCTGCGC
GACAAGGGCGACGGCGGCATGGCCGACATGCTCACCGGCGTCGACTTCACGCCGGGCGAGGGCATCGACTTCGGCGCGAT
GGGCGAGGTCCTGCTGCTCGCGCTCGGCACGTTCCTCGCGGCCGGCCTGCTGCTGGCCGTGGCGACCCGGCTCTCCAACC
GCGCCATCAACCGGACCGTCTTCCGGTTGCGTGGCGACGTACAGGAGAAGCTGTCGCGGCTTCCGCTGTCGTACTTCGAC
AAGCGGCAGCGCGGCGAGGTGCTGAGCCGTGCCACGAACGACATCGACAACATCAACCAGACGCTCCAGCAGACGATGGG
CCAGCTCATCAACTCGCTGCTGACGATCATCGGCGTGCTGGTCATGATGTTCTGGGTGTCGCCGCTGCTCGCGCTGGTGG
CGCTGGTCACCGTGCCGCTGTCGTTCTTCGTGGCGATGAAGGTCGGCAAGCGGTCTCAGCCGCAGTTCGTGCAGCAGTGG
AAGACCACCGGCAAGCTGAACGCGCACATCGAGGAGATGTACACCGGGCACGCCCTGGTGAAGGTGTTCGGCCGGCAGGA
GGAGTCGGCGAAGGCGTTCGCCGAGCAGAACGACCAGTTGTACGACGCCGGGTTCAGGGCCCAGTTCATCAGCGGCGCCA
TGCAGCCGCTGATGTTCTTCATCTCGAACCTGAACTATGTCCTGGTGGCCGTGGTGGGCGGGCTGCGGGTCGCGTCGGGC
TCGCTGTCCATCGGTGACGTGCAGGCCTTCATCCAGTACTCGCGGCAGTTCTCGATGCCACTCACGCAGGTCGCCTCGAT
GGCGAACCTCGTGCAGTCGGGCGTCGCGTCCGCCGAGCGGGTCTTCGAGATCCTCGACGCCGAGGAGCAGGAGGCCGACC
CGGTGCCGGGCGAGCGTCCCGCGAAGCTCAGCGGGCGGGTCGAGATGGAGCACGTCTCCTTCCGCTACGCCGAGGACAAG
CCGCTCATCGAGGACCTGTCCCTGGTCGTGGAGCCCGGCCACACCGTCGCCATCGTCGGGCCGACCGGCGCGGGCAAGAC
GACGCTGGTCAACCTGCTCATGCGGTTCTACGAGGTGACGGGCGGGCGCATCACGCTGGACGGCGTCGACATCGCCGGCA
TGTCGCGGGACGAACTGCGGGCCGGGATCGGCATGGTCCTCCAGGACACCTGGCTCTTCGGAGGCACCATCGCGGAGAAC
ATCGCGTACGGCGCGGCGAAGGAGGTCACGCGCGAGGAGGTCGAGGAGGCGGCGCGCGCGGCCCACGCGGACCGTTTCGT
GCGCACCCTGCCCGACGGGTACGACACGGTGATCGACGACGACGGCACGGGCGTGAGCGCGGGCGAGAAGCAGCTCATCA
CCATCGCGCGGGCGTTCCTGTCCGATCCGGTGATCCTGGTGCTCGACGAGGCGACGAGTTCGGTCGACACCCGCACGGAG
GTGCTCATCCAGAAGGCGATGGCACGCCTCGCGCACGGGCGTACTTCTTTCGTCATCGCGCACCGGCTGTCCACGATCCG
TGACGCCGACACGATTTTGGTGATGGAGAACGGAGCGATCGTCGAGCAGGGGACGCACGATGCCCTGCTGGCGGCGGGCG
GGGCGTATGCGCGGTTGTACGCGGCGCAGTTCGCGGAGGCGGTGGCGGAGGTCGACTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(33-341)

ABC transporter (ABC_tran)

(404-553)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.586

97.785

0.407