Detailed information NTG0499614

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JFY30_RS19640
• Genome accession: NZ_CP075665
• Coordinates: 3938466..3939491 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain STEC2018-553
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3933466..3944491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JFY30_RS19610 (JFY30_19610)	zapB	3933550..3933795 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
JFY30_RS19615 (JFY30_19615)	rraA	3933880..3934365 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JFY30_RS19620 (JFY30_19620)	menA	3934458..3935384 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JFY30_RS19625 (JFY30_19625)	hslU	3935451..3936782 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
JFY30_RS19630 (JFY30_19630)	hslV	3936792..3937322 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JFY30_RS19635 (JFY30_19635)	ftsN	3937415..3938374 (-)	960	WP_000068834.1	cell division protein FtsN	-
JFY30_RS19640 (JFY30_19640)	cytR	3938466..3939491 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JFY30_RS19645 (JFY30_19645)	priA	3939647..3941845 (-)	2199	WP_001368117.1	primosomal protein N'	Machinery gene
JFY30_RS19650 (JFY30_19650)	rpmE	3942048..3942260 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=499614 JFY30_RS19640 WP_000644904.1 3938466..3939491(-) (cytR) [Escherichia coli strain STEC2018-553]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=499614 JFY30_RS19640 WP_000644904.1 3938466..3939491(-) (cytR) [Escherichia coli strain STEC2018-553]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628