Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   IRA68_RS25110 Genome accession   NZ_CP064097
Coordinates   4817451..4817891 (+) Length   146 a.a.
NCBI ID   WP_033579940.1    Uniprot ID   A0A806UCC3
Organism   Priestia aryabhattai strain B2     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 4812451..4822891
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRA68_RS25095 - 4813086..4814644 (+) 1559 WP_231099258.1 IS3 family transposase -
  IRA68_RS25100 - 4814706..4816655 (-) 1950 WP_243495063.1 FUSC family protein -
  IRA68_RS25105 - 4816812..4817072 (-) 261 WP_013058561.1 metal-sensitive transcriptional regulator -
  IRA68_RS25110 nucA/comI 4817451..4817891 (+) 441 WP_033579940.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  IRA68_RS25115 comJ 4817927..4818334 (+) 408 WP_243495064.1 competence protein ComJ -
  IRA68_RS25120 - 4818436..4819026 (-) 591 WP_243495065.1 CPBP family intramembrane glutamic endopeptidase -
  IRA68_RS25125 helD 4819411..4821729 (-) 2319 WP_243495066.1 RNA polymerase recycling motor HelD -
  IRA68_RS28465 - 4821973..4822098 (-) 126 WP_016765178.1 hypothetical protein -
  IRA68_RS25130 - 4822238..4822753 (-) 516 WP_033579937.1 enoyl-CoA hydratase/isomerase family protein -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16032.88 Da        Isoelectric Point: 4.4411

>NTDB_id=499581 IRA68_RS25110 WP_033579940.1 4817451..4817891(+) (nucA/comI) [Priestia aryabhattai strain B2]
MSTYGKKLMASLFIIIACVLGFIGHAAFLAPEKTEAEVNYDATLYFPLDRYPETGDHIRDAIAAGHSSVCTIDRDGAEAN
REESLKGYPTKTGYDRDEWPMAMCEEGGAGADIRYISPSDNRGAGSWVGNQLEQYPDGTRVQFIVQ

Nucleotide


Download         Length: 441 bp        

>NTDB_id=499581 IRA68_RS25110 WP_033579940.1 4817451..4817891(+) (nucA/comI) [Priestia aryabhattai strain B2]
ATGAGTACATACGGGAAAAAATTAATGGCAAGTCTATTCATTATCATTGCATGCGTTTTAGGGTTTATAGGACATGCAGC
GTTTTTAGCTCCTGAAAAAACGGAAGCCGAAGTAAACTATGATGCAACGCTTTATTTTCCACTGGACCGATATCCTGAAA
CGGGTGATCATATTCGCGACGCGATTGCCGCTGGTCACTCTTCCGTTTGCACAATTGATCGCGACGGTGCTGAAGCGAAT
CGGGAAGAATCGCTGAAAGGATACCCAACAAAAACAGGATATGACCGCGATGAATGGCCAATGGCTATGTGCGAAGAAGG
CGGAGCGGGAGCTGATATTCGCTATATTTCACCTTCTGATAACCGCGGAGCGGGCTCATGGGTTGGAAATCAATTAGAAC
AATACCCAGATGGTACACGCGTACAATTTATCGTGCAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(52-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A806UCC3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

65.079

86.301

0.562