Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IRA68_RS21970 Genome accession   NZ_CP064097
Coordinates   4284113..4285063 (-) Length   316 a.a.
NCBI ID   WP_243494860.1    Uniprot ID   -
Organism   Priestia aryabhattai strain B2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4279113..4290063
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRA68_RS21945 - 4279873..4280013 (-) 141 WP_176343797.1 hypothetical protein -
  IRA68_RS21950 - 4280267..4281121 (-) 855 WP_047750489.1 manganese catalase family protein -
  IRA68_RS21955 - 4281441..4282397 (-) 957 WP_033580631.1 siderophore ABC transporter substrate-binding protein -
  IRA68_RS21960 - 4282421..4283179 (-) 759 WP_028414465.1 ABC transporter ATP-binding protein -
  IRA68_RS21965 - 4283173..4284120 (-) 948 WP_034267834.1 iron chelate uptake ABC transporter family permease subunit -
  IRA68_RS21970 ceuB 4284113..4285063 (-) 951 WP_243494860.1 ABC transporter permease Machinery gene
  IRA68_RS28425 - 4285294..4285428 (-) 135 WP_255219778.1 hypothetical protein -
  IRA68_RS21975 - 4285667..4286473 (-) 807 WP_028414468.1 cell wall hydrolase -
  IRA68_RS21980 - 4286836..4287090 (+) 255 WP_013057893.1 hypothetical protein -
  IRA68_RS21985 - 4287172..4287336 (-) 165 WP_013057894.1 hypothetical protein -
  IRA68_RS21990 - 4287669..4287998 (-) 330 WP_057244395.1 hypothetical protein -
  IRA68_RS21995 - 4288042..4289073 (-) 1032 WP_243494861.1 zinc-binding dehydrogenase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34981.21 Da        Isoelectric Point: 9.9188

>NTDB_id=499574 IRA68_RS21970 WP_243494860.1 4284113..4285063(-) (ceuB) [Priestia aryabhattai strain B2]
MKFYQLILVFVVLAVSSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTAVLGAVFVLACDILGRVIIFPYEVSIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=499574 IRA68_RS21970 WP_243494860.1 4284113..4285063(-) (ceuB) [Priestia aryabhattai strain B2]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGTTGTACTAGCGGTTTCGTCTCTTTTTGTAGGAGTACAAGACCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTCTCTCCAACAACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTTGGTTTAATGCTCGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGCGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTCTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGGTGCTTGGAGCTGTATTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAGTTTCTATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497