Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   IRJ28_RS17105 Genome accession   NZ_CP064096
Coordinates   3248304..3248444 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain N1142-3at     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3243304..3253444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ28_RS17100 - 3247186..3248358 (-) 1173 Protein_3354 condensation domain-containing protein -
  IRJ28_RS17105 comS 3248304..3248444 (-) 141 WP_010886404.1 competence protein ComS Regulator
  IRJ28_RS17110 srfAB 3248536..3251580 (-) 3045 Protein_3356 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=499502 IRJ28_RS17105 WP_010886404.1 3248304..3248444(-) (comS) [Bacillus subtilis strain N1142-3at]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=499502 IRJ28_RS17105 WP_010886404.1 3248304..3248444(-) (comS) [Bacillus subtilis strain N1142-3at]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1