Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IRJ28_RS14395 Genome accession   NZ_CP064096
Coordinates   2712901..2713695 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain N1142-3at     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2707901..2718695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ28_RS14360 ephM 2708743..2709603 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  IRJ28_RS14365 spdL 2709590..2709922 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  IRJ28_RS14370 yfhK 2710007..2710525 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  IRJ28_RS14375 yfhJ 2710670..2710939 (-) 270 WP_003243789.1 YfhJ family protein -
  IRJ28_RS14380 sspK 2711064..2711216 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  IRJ28_RS14385 yfhI 2711249..2712442 (-) 1194 WP_003243500.1 MFS transporter -
  IRJ28_RS14390 yfhH 2712585..2712899 (-) 315 WP_003244592.1 YfhH family protein -
  IRJ28_RS14395 recX 2712901..2713695 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  IRJ28_RS14400 yfhF 2713784..2714695 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  IRJ28_RS14405 yfhE 2714750..2714860 (+) 111 WP_003223230.1 YfhE family protein -
  IRJ28_RS14410 yfhD 2714927..2715118 (+) 192 WP_003233561.1 YfhD family protein -
  IRJ28_RS14415 yfhC 2715157..2715741 (-) 585 WP_003243940.1 nitroreductase -
  IRJ28_RS14420 yfhB 2715829..2716710 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  IRJ28_RS14425 sxzA 2716825..2717856 (-) 1032 WP_003243057.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=499492 IRJ28_RS14395 WP_003243354.1 2712901..2713695(-) (recX) [Bacillus subtilis strain N1142-3at]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=499492 IRJ28_RS14395 WP_003243354.1 2712901..2713695(-) (recX) [Bacillus subtilis strain N1142-3at]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1