Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   IRJ28_RS12760 Genome accession   NZ_CP064096
Coordinates   2409612..2410268 (-) Length   218 a.a.
NCBI ID   WP_003245194.1    Uniprot ID   A0AAE2VF25
Organism   Bacillus subtilis strain N1142-3at     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2404612..2415268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ28_RS12735 spxH 2404823..2405722 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  IRJ28_RS12740 - 2406036..2406203 (+) 168 WP_003244944.1 hypothetical protein -
  IRJ28_RS12745 pepF 2406241..2408070 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  IRJ28_RS12750 coiA 2408300..2409421 (-) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  IRJ28_RS12755 - 2409495..2409617 (+) 123 WP_003245684.1 hypothetical protein -
  IRJ28_RS12760 mecA 2409612..2410268 (-) 657 WP_003245194.1 adaptor protein MecA Regulator
  IRJ28_RS12765 - 2410235..2410375 (-) 141 WP_119122854.1 hypothetical protein -
  IRJ28_RS12770 yjbE 2410545..2411201 (+) 657 WP_003232944.1 TerC family protein -
  IRJ28_RS12775 spx 2411244..2411639 (-) 396 WP_003245483.1 transcriptional regulator Spx -
  IRJ28_RS12780 yjbC 2411820..2412398 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  IRJ28_RS12785 yjbB 2412562..2413779 (-) 1218 WP_010886478.1 MFS transporter -
  IRJ28_RS12790 oppF 2413886..2414803 (-) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25763.69 Da        Isoelectric Point: 4.1174

>NTDB_id=499480 IRJ28_RS12760 WP_003245194.1 2409612..2410268(-) (mecA) [Bacillus subtilis strain N1142-3at]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=499480 IRJ28_RS12760 WP_003245194.1 2409612..2410268(-) (mecA) [Bacillus subtilis strain N1142-3at]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

100

100

1