Detailed information NTG0499419

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JFX43_RS11850
• Genome accession: NZ_CP075652
• Coordinates: 2431953..2432978 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain STEC17-183
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2426953..2437978

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JFX43_RS11840 (JFX43_011840)	rpmE	2429184..2429396 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
JFX43_RS11845 (JFX43_011845)	priA	2429599..2431797 (+)	2199	WP_001368117.1	primosomal protein N'	Machinery gene
JFX43_RS11850 (JFX43_011850)	cytR	2431953..2432978 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
JFX43_RS11855 (JFX43_011855)	ftsN	2433070..2434029 (+)	960	WP_000068834.1	cell division protein FtsN	-
JFX43_RS11860 (JFX43_011860)	hslV	2434122..2434652 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
JFX43_RS11865 (JFX43_011865)	hslU	2434662..2435993 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
JFX43_RS11870 (JFX43_011870)	menA	2436060..2436986 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JFX43_RS11875 (JFX43_011875)	rraA	2437079..2437564 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
JFX43_RS11880 (JFX43_011880)	zapB	2437649..2437894 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=499419 JFX43_RS11850 WP_000644904.1 2431953..2432978(+) (cytR) [Escherichia coli strain STEC17-183]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=499419 JFX43_RS11850 WP_000644904.1 2431953..2432978(+) (cytR) [Escherichia coli strain STEC17-183]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628