Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   IRJ27_RS07935 Genome accession   NZ_CP064095
Coordinates   1568360..1568500 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain N1303-2Ay     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1563360..1573500
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ27_RS07930 - 1567242..1568414 (-) 1173 Protein_1553 condensation domain-containing protein -
  IRJ27_RS07935 comS 1568360..1568500 (-) 141 WP_010886404.1 competence protein ComS Regulator
  IRJ27_RS07940 srfAB 1568592..1571636 (-) 3045 Protein_1555 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=499386 IRJ27_RS07935 WP_010886404.1 1568360..1568500(-) (comS) [Bacillus subtilis strain N1303-2Ay]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=499386 IRJ27_RS07935 WP_010886404.1 1568360..1568500(-) (comS) [Bacillus subtilis strain N1303-2Ay]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1