Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IRJ27_RS05225 Genome accession   NZ_CP064095
Coordinates   1032955..1033749 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain N1303-2Ay     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1027955..1038749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ27_RS05190 ephM 1028797..1029657 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  IRJ27_RS05195 spdL 1029644..1029976 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  IRJ27_RS05200 yfhK 1030061..1030579 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  IRJ27_RS05205 yfhJ 1030724..1030993 (-) 270 WP_003243789.1 YfhJ family protein -
  IRJ27_RS05210 sspK 1031118..1031270 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  IRJ27_RS05215 yfhI 1031303..1032496 (-) 1194 WP_003243500.1 MFS transporter -
  IRJ27_RS05220 yfhH 1032639..1032953 (-) 315 WP_003244592.1 YfhH family protein -
  IRJ27_RS05225 recX 1032955..1033749 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  IRJ27_RS05230 yfhF 1033838..1034749 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  IRJ27_RS05235 yfhE 1034804..1034914 (+) 111 WP_003223230.1 YfhE family protein -
  IRJ27_RS05240 yfhD 1034981..1035172 (+) 192 WP_003233561.1 YfhD family protein -
  IRJ27_RS05245 yfhC 1035211..1035795 (-) 585 WP_003243940.1 nitroreductase -
  IRJ27_RS05250 yfhB 1035883..1036764 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  IRJ27_RS05255 sxzA 1036879..1037910 (-) 1032 WP_003243057.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=499376 IRJ27_RS05225 WP_003243354.1 1032955..1033749(-) (recX) [Bacillus subtilis strain N1303-2Ay]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=499376 IRJ27_RS05225 WP_003243354.1 1032955..1033749(-) (recX) [Bacillus subtilis strain N1303-2Ay]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1