Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   IRJ27_RS03580 Genome accession   NZ_CP064095
Coordinates   728354..729475 (-) Length   373 a.a.
NCBI ID   WP_010886479.1    Uniprot ID   O31604
Organism   Bacillus subtilis strain N1303-2Ay     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 723354..734475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ27_RS03555 cwlQ 723493..724227 (+) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -
  IRJ27_RS03560 yjbI 724482..724880 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  IRJ27_RS03565 spxH 724877..725776 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  IRJ27_RS03570 - 726090..726257 (+) 168 WP_003244944.1 hypothetical protein -
  IRJ27_RS03575 pepF 726295..728124 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  IRJ27_RS03580 coiA 728354..729475 (-) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  IRJ27_RS03585 - 729549..729671 (+) 123 WP_003245684.1 hypothetical protein -
  IRJ27_RS03590 mecA 729666..730322 (-) 657 WP_003245194.1 adaptor protein MecA Regulator
  IRJ27_RS03595 - 730289..730429 (-) 141 WP_119122854.1 hypothetical protein -
  IRJ27_RS03600 yjbE 730599..731255 (+) 657 WP_003232944.1 TerC family protein -
  IRJ27_RS03605 spx 731298..731693 (-) 396 WP_003245483.1 transcriptional regulator Spx -
  IRJ27_RS03610 yjbC 731874..732452 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  IRJ27_RS03615 yjbB 732616..733833 (-) 1218 WP_010886478.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43689.70 Da        Isoelectric Point: 10.1187

>NTDB_id=499363 IRJ27_RS03580 WP_010886479.1 728354..729475(-) (coiA) [Bacillus subtilis strain N1303-2Ay]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRSECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=499363 IRJ27_RS03580 WP_010886479.1 728354..729475(-) (coiA) [Bacillus subtilis strain N1303-2Ay]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCGCCATAGACATCGAGCCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTCCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB O31604

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

100

1