Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   IRJ26_RS05715 Genome accession   NZ_CP064094
Coordinates   1079520..1079660 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain N1108-5at     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1074520..1084660
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ26_RS05710 - 1078402..1079574 (-) 1173 Protein_1107 condensation domain-containing protein -
  IRJ26_RS05715 comS 1079520..1079660 (-) 141 WP_010886404.1 competence protein ComS Regulator
  IRJ26_RS05720 srfAB 1079752..1082796 (-) 3045 Protein_1109 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=499294 IRJ26_RS05715 WP_010886404.1 1079520..1079660(-) (comS) [Bacillus subtilis strain N1108-5at]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=499294 IRJ26_RS05715 WP_010886404.1 1079520..1079660(-) (comS) [Bacillus subtilis strain N1108-5at]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1