Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   IRJ24_RS03450 Genome accession   NZ_CP064093
Coordinates   663251..663391 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain N1282-4at     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 658251..668391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ24_RS03445 - 662133..663305 (-) 1173 Protein_654 condensation domain-containing protein -
  IRJ24_RS03450 comS 663251..663391 (-) 141 WP_010886404.1 competence protein ComS Regulator
  IRJ24_RS03455 srfAB 663483..666527 (-) 3045 Protein_656 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=499194 IRJ24_RS03450 WP_010886404.1 663251..663391(-) (comS) [Bacillus subtilis strain N1282-4at]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=499194 IRJ24_RS03450 WP_010886404.1 663251..663391(-) (comS) [Bacillus subtilis strain N1282-4at]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1