Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IRJ24_RS00740 Genome accession   NZ_CP064093
Coordinates   127856..128650 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain N1282-4at     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 122856..133650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ24_RS00705 ephM 123698..124558 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  IRJ24_RS00710 spdL 124545..124877 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  IRJ24_RS00715 yfhK 124962..125480 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  IRJ24_RS00720 yfhJ 125625..125894 (-) 270 WP_003243789.1 YfhJ family protein -
  IRJ24_RS00725 sspK 126019..126171 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  IRJ24_RS00730 yfhI 126204..127397 (-) 1194 WP_003243500.1 MFS transporter -
  IRJ24_RS00735 yfhH 127540..127854 (-) 315 WP_003244592.1 YfhH family protein -
  IRJ24_RS00740 recX 127856..128650 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  IRJ24_RS00745 yfhF 128739..129650 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  IRJ24_RS00750 yfhE 129705..129815 (+) 111 WP_003223230.1 YfhE family protein -
  IRJ24_RS00755 yfhD 129882..130073 (+) 192 WP_003233561.1 YfhD family protein -
  IRJ24_RS00760 yfhC 130112..130696 (-) 585 WP_003243940.1 nitroreductase -
  IRJ24_RS00765 yfhB 130784..131665 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  IRJ24_RS00770 sxzA 131780..132811 (-) 1032 WP_003243057.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=499184 IRJ24_RS00740 WP_003243354.1 127856..128650(-) (recX) [Bacillus subtilis strain N1282-4at]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=499184 IRJ24_RS00740 WP_003243354.1 127856..128650(-) (recX) [Bacillus subtilis strain N1282-4at]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1