Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   IRJ22_RS11935 Genome accession   NZ_CP064092
Coordinates   2264329..2264469 (-) Length   46 a.a.
NCBI ID   WP_003184860.1    Uniprot ID   P69890
Organism   Bacillus licheniformis strain C5     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2259329..2269469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ22_RS11915 comP 2259472..2261778 (-) 2307 WP_161658321.1 histidine kinase Regulator
  IRJ22_RS11920 comX 2261801..2261965 (-) 165 WP_003184853.1 competence pheromone ComX -
  IRJ22_RS11925 - 2261974..2262855 (-) 882 WP_003184856.1 polyprenyl synthetase family protein -
  IRJ22_RS11930 - 2263124..2264283 (+) 1160 Protein_2375 IS3 family transposase -
  IRJ22_RS11935 degQ 2264329..2264469 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  IRJ22_RS11940 - 2264955..2265302 (+) 348 WP_009329512.1 hypothetical protein -
  IRJ22_RS11945 - 2265345..2266565 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  IRJ22_RS11950 - 2266744..2268153 (-) 1410 WP_228767691.1 nicotinate phosphoribosyltransferase -
  IRJ22_RS11955 - 2268231..2268782 (-) 552 WP_003184868.1 cysteine hydrolase family protein -
  IRJ22_RS11960 - 2268967..2269368 (-) 402 WP_003184870.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5747.56 Da        Isoelectric Point: 8.4596

>NTDB_id=499156 IRJ22_RS11935 WP_003184860.1 2264329..2264469(-) (degQ) [Bacillus licheniformis strain C5]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKTS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=499156 IRJ22_RS11935 WP_003184860.1 2264329..2264469(-) (degQ) [Bacillus licheniformis strain C5]
GTGGAAAAGCAACAAATTGAAGAATTAAAACAACTGCTTTGGCGGCTAGAGAATGAAATCAGAGAAACAAAGGACTCCTT
GCGCAAGATTAACAAAAGCATTGATCAATACGATAAGTACACATATCTAAAAACCTCGTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P69890

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652