Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   IRJ22_RS01845 Genome accession   NZ_CP064092
Coordinates   356538..357491 (+) Length   317 a.a.
NCBI ID   WP_011197760.1    Uniprot ID   Q65LD8
Organism   Bacillus licheniformis strain C5     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 351538..362491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ22_RS01815 argF 352403..353353 (+) 951 WP_009328852.1 ornithine carbamoyltransferase -
  IRJ22_RS01820 - 353387..354199 (-) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -
  IRJ22_RS01825 - 354381..354560 (+) 180 WP_003180573.1 YjzC family protein -
  IRJ22_RS01830 - 354631..354825 (-) 195 WP_009328851.1 YjzD family protein -
  IRJ22_RS01835 - 355057..355791 (+) 735 WP_011197758.1 hypothetical protein -
  IRJ22_RS01840 - 355878..356453 (+) 576 WP_011197759.1 hypothetical protein -
  IRJ22_RS01845 med 356538..357491 (+) 954 WP_011197760.1 BMP family ABC transporter substrate-binding protein Regulator
  IRJ22_RS01850 comZ 357502..357687 (+) 186 WP_011197761.1 ComZ family protein Regulator
  IRJ22_RS01855 - 357740..357982 (-) 243 WP_011197762.1 hypothetical protein -
  IRJ22_RS01860 - 358152..359090 (+) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  IRJ22_RS01865 fabF 359112..360350 (+) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  IRJ22_RS01870 - 360438..361226 (+) 789 WP_009328844.1 DUF2268 domain-containing protein -
  IRJ22_RS01875 - 361418..362392 (+) 975 WP_009328843.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35421.10 Da        Isoelectric Point: 4.7166

>NTDB_id=499117 IRJ22_RS01845 WP_011197760.1 356538..357491(+) (med) [Bacillus licheniformis strain C5]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHQNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=499117 IRJ22_RS01845 WP_011197760.1 356538..357491(+) (med) [Bacillus licheniformis strain C5]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGACCACCAAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATACAGCATGTAGATGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65LD8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

68.153

99.054

0.675