Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IRJ21_RS16570 Genome accession   NZ_CP064091
Coordinates   3412231..3413022 (+) Length   263 a.a.
NCBI ID   WP_003155502.1    Uniprot ID   A0A9Q3QM78
Organism   Bacillus velezensis strain C1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3407231..3418022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ21_RS16545 - 3409225..3410109 (+) 885 WP_021493842.1 PhzF family phenazine biosynthesis isomerase -
  IRJ21_RS16550 - 3410186..3410770 (+) 585 WP_007408549.1 nitroreductase -
  IRJ21_RS16555 - 3410810..3411001 (-) 192 WP_003155508.1 YfhD family protein -
  IRJ21_RS16560 - 3411072..3411182 (-) 111 WP_003155504.1 YfhE family protein -
  IRJ21_RS16565 - 3411240..3412139 (-) 900 WP_021493841.1 TIGR01777 family oxidoreductase -
  IRJ21_RS16570 recX 3412231..3413022 (+) 792 WP_003155502.1 recombination regulator RecX Regulator
  IRJ21_RS16575 - 3413029..3413343 (+) 315 WP_007408553.1 YfhH family protein -
  IRJ21_RS16580 - 3413488..3414681 (+) 1194 WP_025284446.1 MFS transporter -
  IRJ21_RS16585 - 3414721..3415110 (-) 390 WP_022552786.1 DUF2606 family protein -
  IRJ21_RS16590 - 3415073..3415984 (-) 912 WP_029973980.1 serine protease -
  IRJ21_RS16595 - 3416129..3416281 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  IRJ21_RS16600 - 3416405..3416674 (+) 270 WP_095273206.1 YfhJ family protein -
  IRJ21_RS16605 - 3416806..3417333 (+) 528 WP_015417063.1 SH3 domain-containing protein -
  IRJ21_RS16610 - 3417419..3417754 (+) 336 WP_095273205.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30978.18 Da        Isoelectric Point: 6.2735

>NTDB_id=499090 IRJ21_RS16570 WP_003155502.1 3412231..3413022(+) (recX) [Bacillus velezensis strain C1]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=499090 IRJ21_RS16570 WP_003155502.1 3412231..3413022(+) (recX) [Bacillus velezensis strain C1]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAGAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCTTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGCGCGTTTACATTTGATGAGCAAATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGTTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.087

100

0.791