Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IRB21_RS07160 Genome accession   NZ_CP064089
Coordinates   1437176..1437373 (+) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain N435-3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1432176..1442373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRB21_RS07130 - 1432576..1432755 (+) 180 WP_008348517.1 YjzC family protein -
  IRB21_RS07135 - 1432925..1434190 (+) 1266 WP_008348516.1 MFS transporter -
  IRB21_RS07140 - 1434310..1434504 (-) 195 WP_008348514.1 YjzD family protein -
  IRB21_RS07145 - 1434717..1435457 (+) 741 WP_007499048.1 hypothetical protein -
  IRB21_RS07150 - 1435533..1436108 (+) 576 WP_224559526.1 nad binding enzyme -
  IRB21_RS07155 med 1436199..1437164 (+) 966 WP_242731869.1 BMP family ABC transporter substrate-binding protein Regulator
  IRB21_RS07160 comZ 1437176..1437373 (+) 198 WP_008348507.1 ComZ family protein Regulator
  IRB21_RS07165 - 1437577..1437810 (-) 234 WP_008348506.1 hypothetical protein -
  IRB21_RS07170 - 1437980..1438918 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  IRB21_RS07175 fabF 1438940..1440181 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  IRB21_RS07180 - 1440259..1441053 (+) 795 WP_056407963.1 DUF2268 domain-containing protein -
  IRB21_RS07185 - 1441225..1442205 (+) 981 WP_144666823.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=498950 IRB21_RS07160 WP_008348507.1 1437176..1437373(+) (comZ) [Bacillus altitudinis strain N435-3]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=498950 IRB21_RS07160 WP_008348507.1 1437176..1437373(+) (comZ) [Bacillus altitudinis strain N435-3]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGAATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662