Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IRB21_RS06770 Genome accession   NZ_CP064089
Coordinates   1354295..1355245 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain N435-3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1349295..1360245
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRB21_RS06750 - 1350528..1351010 (+) 483 WP_242731845.1 hypothetical protein -
  IRB21_RS06755 - 1351041..1352480 (-) 1440 WP_017360233.1 PLP-dependent aminotransferase family protein -
  IRB21_RS06760 - 1352624..1353793 (+) 1170 WP_081114756.1 MFS transporter -
  IRB21_RS06765 - 1353857..1354135 (+) 279 WP_024720011.1 barstar family protein -
  IRB21_RS06770 ceuB 1354295..1355245 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  IRB21_RS06775 - 1355238..1356188 (+) 951 WP_242731847.1 iron chelate uptake ABC transporter family permease subunit -
  IRB21_RS06780 - 1356179..1356937 (+) 759 WP_019743341.1 ATP-binding cassette domain-containing protein -
  IRB21_RS06785 - 1356960..1357904 (+) 945 WP_242731849.1 siderophore ABC transporter substrate-binding protein -
  IRB21_RS06790 - 1358043..1358999 (+) 957 WP_242731851.1 LCP family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=498946 IRB21_RS06770 WP_017366964.1 1354295..1355245(+) (ceuB) [Bacillus altitudinis strain N435-3]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=498946 IRB21_RS06770 WP_017366964.1 1354295..1355245(+) (ceuB) [Bacillus altitudinis strain N435-3]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATTCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGTCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGACGTTATGAACTACTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494