Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   IRB21_RS05760 Genome accession   NZ_CP064089
Coordinates   1167459..1168250 (+) Length   263 a.a.
NCBI ID   WP_242731786.1    Uniprot ID   -
Organism   Bacillus altitudinis strain N435-3     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1162459..1173250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRB21_RS05725 - 1162549..1163097 (+) 549 WP_008341670.1 thioredoxin family protein -
  IRB21_RS05730 - 1163436..1163903 (+) 468 WP_025206964.1 DUF393 domain-containing protein -
  IRB21_RS05735 - 1163939..1165195 (-) 1257 WP_008341668.1 transcriptional regulator -
  IRB21_RS05740 - 1165466..1166053 (+) 588 WP_073415738.1 nitroreductase -
  IRB21_RS05745 - 1166087..1166242 (-) 156 WP_008341997.1 YfhD family protein -
  IRB21_RS05750 - 1166304..1166414 (-) 111 WP_017358836.1 YfhE family protein -
  IRB21_RS05755 - 1166467..1167363 (-) 897 WP_216099521.1 TIGR01777 family oxidoreductase -
  IRB21_RS05760 recX 1167459..1168250 (+) 792 WP_242731786.1 recombination regulator RecX Regulator
  IRB21_RS05765 - 1168254..1168568 (+) 315 WP_024720285.1 YfhH family protein -
  IRB21_RS05770 - 1168795..1168968 (-) 174 WP_003217811.1 YpzG family protein -
  IRB21_RS05775 - 1168994..1169143 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  IRB21_RS05780 - 1169260..1169532 (+) 273 WP_017366871.1 YfhJ family protein -
  IRB21_RS05785 - 1169834..1170817 (+) 984 WP_008341983.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30629.05 Da        Isoelectric Point: 7.5049

>NTDB_id=498941 IRB21_RS05760 WP_242731786.1 1167459..1168250(+) (recX) [Bacillus altitudinis strain N435-3]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYNGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=498941 IRB21_RS05760 WP_242731786.1 1167459..1168250(+) (recX) [Bacillus altitudinis strain N435-3]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AGTTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTAAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCTTTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATAATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635