Detailed information NTG0498795

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: KHS93_RS06810
• Genome accession: NZ_CP075547
• Coordinates: 1312630..1314726 (-)
• Length: 698 a.a.
• NCBI ID: WP_143255905.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain SN16-1
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 1307630..1319726

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHS93_RS06785 (KHS93_06785)	-	1308219..1308479 (+)	261	WP_003154690.1	aspartyl-phosphate phosphatase Spo0E family protein	-
KHS93_RS06790 (KHS93_06790)	-	1308690..1310207 (-)	1518	WP_046559543.1	ATP-binding protein	-
KHS93_RS06795 (KHS93_06795)	-	1310406..1310852 (+)	447	WP_003154686.1	MarR family transcriptional regulator	-
KHS93_RS06800 (KHS93_06800)	motB	1310888..1311673 (-)	786	WP_003154685.1	flagellar motor protein MotB	-
KHS93_RS06805 (KHS93_06805)	motA	1311645..1312460 (-)	816	WP_003154684.1	flagellar motor stator protein MotA	-
KHS93_RS06810 (KHS93_06810)	clpE	1312630..1314726 (-)	2097	WP_143255905.1	ATP-dependent protease ATP-binding subunit ClpE	Regulator
KHS93_RS06815 (KHS93_06815)	-	1315128..1316165 (+)	1038	WP_003154681.1	membrane protein	-
KHS93_RS06820 (KHS93_06820)	-	1316263..1317384 (+)	1122	WP_057079971.1	hypothetical protein	-
KHS93_RS06825 (KHS93_06825)	queC	1317634..1318293 (+)	660	WP_003154679.1	7-cyano-7-deazaguanine synthase QueC	-
KHS93_RS06830 (KHS93_06830)	queD	1318294..1318734 (+)	441	WP_003154678.1	6-carboxytetrahydropterin synthase QueD	-
KHS93_RS06835 (KHS93_06835)	queE	1318727..1319458 (+)	732	WP_003154676.1	7-carboxy-7-deazaguanine synthase QueE	-

Sequence

Protein

• Length: 698 a.a.
• Molecular weight: 77799.86 Da
• Isoelectric Point: 5.2991

>NTDB_id=498795 KHS93_RS06810 WP_143255905.1 1312630..1314726(-) (clpE) [Bacillus amyloliquefaciens strain SN16-1]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPNQNKQQAGPEKGLLDELAQNV
TNGAKAGLIDPVIGRDNEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPTIEQAISILEGIKDKYEKYHGVTFSNEAINACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EDAAERLKAIDAEKTKALREENYELAAKLRDEEAALEKQLAHETPASSPEIGAEHIQAIIEQKTGIPVGKLQADEQIKMK
ELEEHLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQVKVGFQSEESVMEEQTLIDSLSAFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLTELEDTLKERGISLSVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDGIKVRAQ

Nucleotide

• Length: 2097 bp

>NTDB_id=498795 KHS93_RS06810 WP_143255905.1 1312630..1314726(-) (clpE) [Bacillus amyloliquefaciens strain SN16-1]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGGCCGCAATCATTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCCAATCAAAATAAACAGCAGGCCGGCCCTGAAAAAGGCCTGCTCGACGAGCTCGCTCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGACCCTGTGATCGGCCGCGATAATGAAGTGGCGCGCGTAATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGTAAAACGGCTATTGCAGAAGGCCTCGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAACAAATTGAAAAACAAAGAGCTTTACCTGCTTGACGTCGCTTCTCTCGTCGCCAAT
ACAGGGATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAACGGAAAAATGTCATCTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCGGCGC
TTGCCAGAGGCGAGCTGCAGGTCATCGGGGCGACAACGCTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTACAATAGAACAAGCCATCAGCATTCTGGAAGGCATTAAAGATAAATA
CGAGAAATACCACGGCGTCACATTCAGCAATGAAGCGATAAACGCCTGTGTTACGCTTTCATCCCGTTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTATTAGATGAAGCCGGCTCTAAGGCGAACCTGGAACTTGATACCGTAAATGAA
GAAGATGCGGCTGAGAGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCGGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCGGCTTTGGAAAAGCAGCTGGCGCATGAAACACCGGCCTCTTCACCTGAAATCGGCGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTCCAGGCTGATGAACAAATCAAAATGAAG
GAACTTGAAGAGCATCTTCATCAGCGTGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTCAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGAGTCGGAAAAACCGAGT
TATCAAAGACACTCGCAGATGAACTGTTCGGTACAAAAGATTCCATTATCCGTCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTATCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
CCGCAATCCGTACAGCATCGTGCTGCTCGATGAGATTGAAAAAGCCCACCCTGATGTCCAGCATATGTTTCTGCAGATTA
TGGAGGACGGCCGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATTATGACAAGCAACGCT
GGAACCGGCGAAAAACAGGTGAAAGTCGGATTCCAATCTGAAGAGAGCGTCATGGAAGAACAAACGCTGATTGATTCACT
GAGCGCGTTCTTCAAACCGGAGTTTTTAAACCGGTTTGACAGCATTATTGAATTCCAATCCCTGAAAAAAGAACATCTCG
TGAAAATCGTCAGCCTGCTTCTCACAGAGCTTGAAGACACATTAAAAGAGCGCGGCATCAGCCTGAGCGTCACCGATGAT
GCGAAGGAAAAAATCGCTGAAATCGGCTACCACCCCGCTTTCGGAGCACGCCCGCTCAGAAGAACCATCCAAGAATTGAT
CGAGGACGAAATGACAGATCTCTTATTGGATGACAACGAAATCAAAGCCTTCCATGTCGTAATGGAAGAGGACGGCATCA
AAGTCCGGGCACAATAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (436-602)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (608-679)

• AAA lid domain (AAA_lid_9) (252-351)

• ATPase family associated with various cellular activities (AAA) (AAA) (115-246)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	57.007	100	0.6
clpC	Lactococcus lactis subsp. cremoris KW2	56.676	100	0.596
clpE	Streptococcus pneumoniae Rx1	56.267	100	0.592
clpE	Streptococcus pneumoniae R6	56.267	100	0.592
clpE	Streptococcus pneumoniae D39	56.267	100	0.592
clpE	Streptococcus pneumoniae TIGR4	56.267	100	0.592
clpC	Bacillus subtilis subsp. subtilis str. 168	54.232	91.404	0.496
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.677	90.544	0.423
clpC	Streptococcus thermophilus LMD-9	44.154	93.123	0.411
clpC	Streptococcus thermophilus LMG 18311	43.846	93.123	0.408
clpC	Streptococcus pneumoniae TIGR4	45.88	88.682	0.407
clpC	Streptococcus pneumoniae Rx1	45.88	88.682	0.407
clpC	Streptococcus pneumoniae D39	45.88	88.682	0.407
clpC	Streptococcus mutans UA159	44.553	88.109	0.393