Detailed information NTG0498712

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: KIK01_RS05940
• Genome accession: NZ_CP075489
• Coordinates: 1174211..1175257 (-)
• Length: 348 a.a.
• NCBI ID: WP_016265215.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei subsp. sakei strain ob4.1
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1169211..1180257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIK01_RS05915 (KIK01_05915)	rpsT	1169274..1169528 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
KIK01_RS05920 (KIK01_05920)	holA	1169596..1170624 (-)	1029	WP_025015735.1	DNA polymerase III subunit delta	-
KIK01_RS05925 (KIK01_05925)	comEC	1170621..1172687 (-)	2067	WP_250130344.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KIK01_RS05930 (KIK01_05930)	-	1172885..1173373 (-)	489	WP_011374770.1	ComE operon protein 2	-
KIK01_RS05935 (KIK01_05935)	comEA	1173431..1174138 (-)	708	WP_250130345.1	helix-hairpin-helix domain-containing protein	Machinery gene
KIK01_RS05940 (KIK01_05940)	sepM	1174211..1175257 (-)	1047	WP_016265215.1	SepM family pheromone-processing serine protease	Regulator
KIK01_RS05945 (KIK01_05945)	coaD	1175259..1175756 (-)	498	WP_016265216.1	pantetheine-phosphate adenylyltransferase	-
KIK01_RS05950 (KIK01_05950)	rsmD	1175769..1176323 (-)	555	WP_016265217.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
KIK01_RS05955 (KIK01_05955)	-	1176328..1176618 (-)	291	WP_016265218.1	YlbG family protein	-
KIK01_RS05960 (KIK01_05960)	-	1176642..1177730 (-)	1089	WP_016265219.1	CAP-associated domain-containing protein	-
KIK01_RS05965 (KIK01_05965)	-	1177741..1178928 (-)	1188	WP_025015730.1	FtsW/RodA/SpoVE family cell cycle protein	-
KIK01_RS05970 (KIK01_05970)	-	1178937..1179233 (-)	297	WP_112206198.1	DUF1507 family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38071.80 Da
• Isoelectric Point: 9.2830

>NTDB_id=498712 KIK01_RS05940 WP_016265215.1 1174211..1175257(-) (sepM) [Latilactobacillus sakei subsp. sakei strain ob4.1]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESSDELMGDEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLDNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPGTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRKIAGTGTMAAEGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=498712 KIK01_RS05940 WP_016265215.1 1174211..1175257(-) (sepM) [Latilactobacillus sakei subsp. sakei strain ob4.1]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACAGTCGGTGTCAGAGGCCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTAGCGATGAACTAATGGGCGATGAAGATACCGAAGCTTACGAACAAATCCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGACAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACCAGGGACGCATCATCCAGGTCTTGGGATTACGT
TAACCGATCACTCTAAGATTGAGACTGATATTCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTAAAATTGCGGGGACCGGCACAAT
GGCTGCTGAAGGCACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACCGTCT
TTTTTGCACCTAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
TCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (131-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (221-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	43.966	100	0.44