Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ISN30_RS08335 Genome accession   NZ_CP064005
Coordinates   1928112..1928513 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas translucens pv. translucens strain XtKm7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1923112..1933513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ISN30_RS08325 (ISN30_08325) - 1926040..1926921 (-) 882 WP_058360951.1 energy transducer TonB -
  ISN30_RS08330 (ISN30_08330) gshB 1926918..1927868 (-) 951 WP_003478898.1 glutathione synthase -
  ISN30_RS08335 (ISN30_08335) pilG 1928112..1928513 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  ISN30_RS08340 (ISN30_08340) - 1928530..1928892 (+) 363 WP_003472647.1 response regulator -
  ISN30_RS08345 (ISN30_08345) - 1928894..1929424 (+) 531 WP_003478906.1 chemotaxis protein CheW -
  ISN30_RS08350 (ISN30_08350) - 1929466..1931502 (+) 2037 WP_003478908.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=498505 ISN30_RS08335 WP_003472648.1 1928112..1928513(+) (pilG) [Xanthomonas translucens pv. translucens strain XtKm7]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=498505 ISN30_RS08335 WP_003472648.1 1928112..1928513(+) (pilG) [Xanthomonas translucens pv. translucens strain XtKm7]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGAGTCATGGTGATCGATGACTCGAAGACCATCCGCCG
CACCGCCGAAACGCTGTTGAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGATCAGCAACCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACGCCGGTAATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGTTCCGAGCAGTACCTCACCAAGCCCTTCACACGTGAAGAGCTGCTGGGCGCGATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677