Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ISN32_RS12715 Genome accession   NZ_CP064003
Coordinates   2979456..2979857 (-) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas translucens pv. translucens strain XtKm9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2974456..2984857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ISN32_RS12700 (ISN32_12700) - 2976463..2978499 (-) 2037 WP_058360953.1 methyl-accepting chemotaxis protein -
  ISN32_RS12705 (ISN32_12705) - 2978540..2979070 (-) 531 WP_058360952.1 chemotaxis protein CheW -
  ISN32_RS12710 (ISN32_12710) - 2979072..2979434 (-) 363 WP_003472647.1 response regulator -
  ISN32_RS12715 (ISN32_12715) pilG 2979456..2979857 (-) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  ISN32_RS12720 (ISN32_12720) gshB 2980101..2981051 (+) 951 WP_003478898.1 glutathione synthase -
  ISN32_RS12725 (ISN32_12725) - 2981048..2981929 (+) 882 WP_058360951.1 energy transducer TonB -
  ISN32_RS12730 (ISN32_12730) - 2982320..2983465 (-) 1146 Protein_2527 IS3 family transposase -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=498480 ISN32_RS12715 WP_003472648.1 2979456..2979857(-) (pilG) [Xanthomonas translucens pv. translucens strain XtKm9]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=498480 ISN32_RS12715 WP_003472648.1 2979456..2979857(-) (pilG) [Xanthomonas translucens pv. translucens strain XtKm9]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGAGTGATGGTGATCGATGACTCGAAGACGATCCGCCG
CACCGCCGAAACGCTGTTGAAGCGCGAAGGCTGCGAGGTGGTCACTGCCACCGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGATCAGCAACCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCCACGCCGGTGATCATGTTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGTTCCGAGCAGTACCTCACCAAACCCTTCACACGCGAAGAGCTGTTGGGCGCGATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677