Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ISN38_RS05230 Genome accession   NZ_CP063993
Coordinates   1265425..1265826 (-) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas translucens pv. undulosa strain XtLr8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1260425..1270826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ISN38_RS05215 (ISN38_05210) - 1262437..1264473 (-) 2037 WP_003472641.1 methyl-accepting chemotaxis protein -
  ISN38_RS05220 (ISN38_05215) - 1264514..1265044 (-) 531 WP_003472644.1 chemotaxis protein CheW -
  ISN38_RS05225 (ISN38_05220) - 1265046..1265408 (-) 363 WP_003472647.1 response regulator -
  ISN38_RS05230 (ISN38_05225) pilG 1265425..1265826 (-) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  ISN38_RS05235 (ISN38_05230) gshB 1266070..1267020 (+) 951 WP_003472649.1 glutathione synthase -
  ISN38_RS05240 (ISN38_05235) - 1267017..1267898 (+) 882 WP_047324630.1 energy transducer TonB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=498375 ISN38_RS05230 WP_003472648.1 1265425..1265826(-) (pilG) [Xanthomonas translucens pv. undulosa strain XtLr8]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=498375 ISN38_RS05230 WP_003472648.1 1265425..1265826(-) (pilG) [Xanthomonas translucens pv. undulosa strain XtLr8]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGAGTCATGGTGATCGATGACTCGAAGACCATCCGCCG
CACCGCCGAAACGCTGTTGAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGATCAGCAACCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACGCCGGTAATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGTTCCGAGCAGTACCTCACCAAGCCCTTCACACGTGAAGAGCTGCTGGGCGCGATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677