Detailed information NTG0498348

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: IGI33_RS00875
• Genome accession: NZ_CP075477
• Coordinates: 173342..174325 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain NT1W25
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 168342..179325

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IGI33_RS23450	-	168633..169133 (+)	501	WP_000469069.1	hypothetical protein	-
IGI33_RS00860	dppA	169485..171092 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
IGI33_RS00865	dppB	171400..172419 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
IGI33_RS00870	dppC	172429..173331 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
IGI33_RS00875	amiE	173342..174325 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
IGI33_RS00880	dppF	174322..175326 (+)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
IGI33_RS00885	yhjV	175356..176627 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
IGI33_RS00890	-	177103..177210 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
IGI33_RS00895	-	177586..177693 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
IGI33_RS00900	-	178069..178176 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=498348 IGI33_RS00875 WP_001196486.1 173342..174325(+) (amiE) [Escherichia coli strain NT1W25]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=498348 IGI33_RS00875 WP_001196486.1 173342..174325(+) (amiE) [Escherichia coli strain NT1W25]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCTCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGTTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404