Detailed information NTG0498252

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: IGI24_RS22105
• Genome accession: NZ_CP075472
• Coordinates: 4376593..4377618 (+)
• Length: 341 a.a.
• NCBI ID: WP_032298229.1
• Uniprot ID: -
• Organism: Escherichia coli strain NT1F25
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4371593..4382618

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IGI24_RS22080	metJ	4372030..4372347 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
IGI24_RS22085	yiiX	4372531..4373139 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
IGI24_RS22090	-	4373146..4373769 (+)	624	WP_000720774.1	TIGR02117 family protein	-
IGI24_RS22095	rpmE	4373824..4374036 (-)	213	WP_193125208.1	50S ribosomal protein L31	-
IGI24_RS22100	priA	4374239..4376437 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
IGI24_RS22105	cytR	4376593..4377618 (+)	1026	WP_032298229.1	DNA-binding transcriptional regulator CytR	Regulator
IGI24_RS22110	ftsN	4377710..4378669 (+)	960	WP_000068828.1	cell division protein FtsN	-
IGI24_RS22115	hslV	4378762..4379292 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
IGI24_RS22120	hslU	4379302..4380633 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
IGI24_RS22125	menA	4380700..4381626 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
IGI24_RS22130	rraA	4381719..4382204 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
IGI24_RS22135	zapB	4382289..4382534 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.84 Da
• Isoelectric Point: 6.3842

>NTDB_id=498252 IGI24_RS22105 WP_032298229.1 4376593..4377618(+) (cytR) [Escherichia coli strain NT1F25]
MKVKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=498252 IGI24_RS22105 WP_032298229.1 4376593..4377618(+) (cytR) [Escherichia coli strain NT1F25]
GTGAAAGTGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628